Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1028 ATGGGCACTCAACAACACGAAACTCTTCCTGAAGACAATGAGCCTACTGTAAATGATCATGACAGTAATTTTTCAAGCCAAGGCGATCTTACAACTGGGCTTGTTATCCAACCAAGTGTAAATACTGAAAACAGTGAAGTTAACAGACCCGGTGATGATTGTTGTCAGAAATGTAATACCCCGTATATCTATAGACAAGATGTTGTAAAGAGTAATTACAATGGCAATGGTGACAGCAATAATAATGCTAGCAGAAATTCTGACAGGAATGGTGCTGATGGGCATTCTAAGACTGCTCCTCTTTTGGCTGATCAGGTGCGTGTACTGTGGATGGATGAAACTGAATCCACCCAAAGTTTTAGTGACCTAAGAGTTGTTGATCGAGGGTTTTTACATGGGGATTTTGTTGCATCTGCATCAGACCCTACTGGGCAAGTAGGTGTTGTAGTTGATGTGAATATATCTGTTGATTTGTTAGCGTCTGATGGATCTATGGTAAAAGAGGTTTCATCTAAAGACTTAAAACGTATCAGAGATTTCACTGTTGGTGATCATGTGGTGCTTGGTCCCTGGCTGGGCAGAATTGATGATGTTTTAGATAACGTAACTGTTTTATTTGATGATGGTTCAGTGTGTAAAGTCACCAAAGCAGATCCAATGAATCTTAAACCAATTTCTAAAAATATCCTTGAAGATGGACATTTCCCTTATTACCCTGGGCAACGTGTAAGGGCCAactcttcatcagtttttaagAATTCAAGGTGGTTATCTGGTTTGTGGAAAGCTAATAGGTTGGAAGGAACTGTTACCAAGGTTACGGTAGGATCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCAGATTCTTCTATTGCCCCAGCTGAAGAACAGAGTCCAAAAAACTTAAAATTGTTGTCTTGTTTTGCTCATGCAAATTGGCAATTAGGTGACTGGTGTCTCTTACCCCCGTCAGCATTGTCATCCGCAATTTCCTTAGACAAAGGCATATCCAAATTGGAACTTCACAATTCTGTCAACAATGAAATAGATTCTAATCAGACAGGAAGTGGATGTGACTCTGAAGAAGCTACAGTTGAAGAATTTAATGGAAGTAGAGATGCTAATGCTATGGATGTTGATCCAGTGGATGCCTCGAAAGGGAATGAATCAAATAATGAAAATGTCAGAAGCAACACTTCATGTGACTCTAGCTCATGTGGTAGCTCTCTTTCAGTGCCAAAAGATCCTGTTCATGAATCCTGGCCTCTACATCGCAAGAAGATAAGGAAAGTTGTGATCAGGAAAGACAAGAGGGCccgaaagaaagaagaaaattttgaaaaagctCTTCCGATTGTCAACATCAGTACAAAAGTTGATGTTGCCTGGCAGGATGGAACAATAGAGCGTGGACTAGAATCTACCAGTTTGATTCCTATAGATAATCCCGGAGATCATGAATTTGTTGCAGAACAATATGTGGTAGAGAAGACCTCTGAATCTGATGACAGTGAGGATAATTGTCAAATTAGGCGTGTTGGGGTTGTGAGAAGTGTTAATGCCAAAGAGCGGACAGCTTGTGTGAGGTGGTTAAAACCAGTTGCCAGAGCAGAAGATCCTAGAGAGTTTGACAAGGAGGAAGTTGTAAGTGTGTATGAGCTAGAGGGCCATCCTGACTATGATTATTGCTACGGGGATGTGGTGGTTCGGCTTTTACCCGTGTCTTTCTCTTCAGATACAGCTTCTGTTGGAGAGTCCATTGAAGTATCAAAGCATAAAAATGGAGAAAGTGGGGGTAAAAGGGGAACGAAAAACAAAATAGGCAGTAGTAAAGTAGAAAATGGATCCAGTAGTGAGACTTGCATGGAGTTTTCAGACTTGTCTTGGGTCGGAAATATAACTGGCCTAAAGAATGGTGATATTGAAGTTACTTGGGCTGATGGGATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTTGTTGGtcgagatgatgatgatgattcaaTTGCTGCTGGGAGTGAATTAAGTGATGCTGCAAGCTGGGAAACTGTGAATGATGATGAGAAGGAAATCCTTGAGGATTCCAGAGAGGACATTGGTAGGGAAAATTCAAGTAGTGATATTTCCGAGGAAGAAGAGAATGGAGAGAATGACTTTGGTGCAGCTGCTGCTCTTTCTGTTCCCTTAGCTGCCTTCCGATTTGTTACTAGACTGGCCTCTGGAATATTCTCAAGGGGCCAAAGAAATTCAGACCCGGATCACTTGCAGTCAGAAAGTGATAGTGGGCTTCCATCAGAGAGAATCACGAAGACTTCTGAGGCAATAGATGTTAGTGATGAGTCTAATTCTCAGAAACCTATGCTCATTGATGGTGATAATtcagaaaatagaaatggagAAAATGAGGAAGTTGCTTCTCCAGAAGTATCTGAGTCATTATGTGGCTTGAGGACCGATGATGCCCCAGCAAGTTGTGACAATTATTCTTACAGTTTCAAACGCTTTGATATAACTAGAGTTCCTTCAGACCATTATTTTATTGGTGCAAATGGACAGATTAACAATCGTAAATGGCTTAAGAAGGTGCAGCAAGATTGGAGCATACTGCAGAATAACCTCCCTGAGGGAATCTATGTACGAGTTTATGAAGATCGAATGGATCTCTTGAGAGCAGTTATAGTTGGGGCATATGGGACTCTTTACCAAGATggtctttttttctttgattttcacCTTCCAGCAGAGTATCCTGATGTTCCACCATCGGTATATTATCATTCTGGTGGTTGGCGAGTCAACCCTAATTTGTATGAGGAAGGTAAGGTGTGCCTTAGCCTTCTAAATACATGGACAGGGAGAGGAAATGAAGTGTGGGATCCAAAATCTTCGAGCATTCTTCAAGTCCTTGTTTCAGTGCAAGGGTTAGTGCTCAACTCGAAGCCATACTTCAATGAGGCTGGGTATGACAAGCAGGTTGGAACTGCTGAAGGAGAGAAGAACTCGTTGTCTTACAATGAAAGTGCATATTTGAATATCTTGAAGACAATTCTGCATTTAATACGGAAACCCCCCAAGGACTTCGAATTGCTCGCCAAGGAACATTTCAGGATGCGCGGTCCTTATATCCTTAAGGCTTGTGATGCATACATGAATGGTCACTTGATTGGATCTCTGAATAGAGATGCATCTATCAGTGAAAAGAGCTCACAGTATTCAACTTCCTTAGGTTGCAAGCTGATGTTAGCCAAGTTTGCGCCGAAGCTTTTCGCCGCACTGAGTGGGGCTGGAGCTGATTGTGAGGAATTTAAGCATATGAAGGAGTCATTGAATTTGTTAGATACAGTATCTAGTTAA 3366 0.4046 MGTQQHETLPEDNEPTVNDHDSNFSSQGDLTTGLVIQPSVNTENSEVNRPGDDCCQKCNTPYIYRQDVVKSNYNGNGDSNNNASRNSDRNGADGHSKTAPLLADQVRVLWMDETESTQSFSDLRVVDRGFLHGDFVASASDPTGQVGVVVDVNISVDLLASDGSMVKEVSSKDLKRIRDFTVGDHVVLGPWLGRIDDVLDNVTVLFDDGSVCKVTKADPMNLKPISKNILEDGHFPYYPGQRVRANSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPDSSIAPAEEQSPKNLKLLSCFAHANWQLGDWCLLPPSALSSAISLDKGISKLELHNSVNNEIDSNQTGSGCDSEEATVEEFNGSRDANAMDVDPVDASKGNESNNENVRSNTSCDSSSCGSSLSVPKDPVHESWPLHRKKIRKVVIRKDKRARKKEENFEKALPIVNISTKVDVAWQDGTIERGLESTSLIPIDNPGDHEFVAEQYVVEKTSESDDSEDNCQIRRVGVVRSVNAKERTACVRWLKPVARAEDPREFDKEEVVSVYELEGHPDYDYCYGDVVVRLLPVSFSSDTASVGESIEVSKHKNGESGGKRGTKNKIGSSKVENGSSSETCMEFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDDSIAAGSELSDAASWETVNDDEKEILEDSREDIGRENSSSDISEEEENGENDFGAAAALSVPLAAFRFVTRLASGIFSRGQRNSDPDHLQSESDSGLPSERITKTSEAIDVSDESNSQKPMLIDGDNSENRNGENEEVASPEVSESLCGLRTDDAPASCDNYSYSFKRFDITRVPSDHYFIGANGQINNRKWLKKVQQDWSILQNNLPEGIYVRVYEDRMDLLRAVIVGAYGTLYQDGLFFFDFHLPAEYPDVPPSVYYHSGGWRVNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSVQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLSYNESAYLNILKTILHLIRKPPKDFELLAKEHFRMRGPYILKACDAYMNGHLIGSLNRDASISEKSSQYSTSLGCKLMLAKFAPKLFAALSGAGADCEEFKHMKESLNLLDTVSS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1028 1121 MobiDBLite consensus disorder prediction 1 30 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 590 620 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 350 421 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 695 720 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 779 795 - -
Sto2g1028 1121 SUPERFAMILY UBC-like 852 1028 IPR016135 -
Sto2g1028 1121 Gene3D Ubiquitin Conjugating Enzyme 832 1090 IPR016135 -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 388 414 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 695 712 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 749 772 - -
Sto2g1028 1121 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 861 1021 IPR000608 -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 749 816 - -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 70 98 - -
Sto2g1028 1121 CDD UBCc 864 1012 IPR000608 -
Sto2g1028 1121 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 23-RELATED 52 1110 - -
Sto2g1028 1121 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 52 1110 - -
Sto2g1028 1121 SMART ubc_7 864 1026 - -
Sto2g1028 1121 Pfam Ubiquitin-conjugating enzyme 866 1010 IPR000608 -
Sto2g1028 1121 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1028 Sto-Chr2 9079956 9086956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1028 115 328 Miscellaneous Gene Families AT2G33770 39.535 2.05e-49 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1028 K10581 - gmx:100809513 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1028 2 9079956 9086956 Sto2g1028 2 9079956 9086956 ECH