Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1007 ATGTCGTCGTCGTCATTGAAGAAGCAGAAGCTTATTCTGATGAGCAGCGATGGCGTAGTCTTCGAGGTGGAGAAGGAGGTAGCCACTGAAATCGGCAGCATGAAGCAATTGATCGGCGATAATCGCAGCATTCACGGTATCATTCCTCTGCCCAACATCAACGCTTCTATCCTCTCTCTGGTTTTAGAGTACTGCCGGAAGCATTCTGAAGCCGAgatcgccgccgccgccgccgataATAGTCTCAAAGCTTGGGACGCCGAATTCATGAGACGCGTGGATAACAATTTCGACTCGCTCTGCGATTTGATAACAGCTGCCAACTCACTGGACATTGAGAGCCTCACGGATTTGACAATGACGGCCTTGGCAAACGTAATCAAATCAAAAAGCTGCGAGGAATTACAACGTGATTTCAATATGTAA 426 0.4437 MSSSSLKKQKLILMSSDGVVFEVEKEVATEIGSMKQLIGDNRSIHGIIPLPNINASILSLVLEYCRKHSEAEIAAAAADNSLKAWDAEFMRRVDNNFDSLCDLITAANSLDIESLTDLTMTALANVIKSKSCEELQRDFNM 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1007 141 PIRSF SCF_Skp 1 141 IPR016897 GO:0006511
Sto2g1007 141 Gene3D Potassium Channel Kv1.1; Chain A 4 141 IPR011333 -
Sto2g1007 141 SUPERFAMILY Skp1 dimerisation domain-like 80 140 IPR036296 GO:0006511
Sto2g1007 141 PANTHER SKP1-LIKE PROTEIN 13 7 141 - -
Sto2g1007 141 SMART skp1_3 8 112 IPR001232 GO:0006511
Sto2g1007 141 PANTHER SKP1 7 141 IPR016897 GO:0006511
Sto2g1007 141 Pfam Skp1 family, tetramerisation domain 10 69 IPR016073 GO:0006511
Sto2g1007 141 SUPERFAMILY POZ domain 10 70 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1007 Sto-Chr2 8870716 8871293 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1007 K03094 - pda:103722611 108.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1007 2 8870716 8871293 Sto2g1007 2 8870716 8871293 ECH