Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0975 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCGAACACATCTGGTCCCACTACCCGTTCCAGTAAGCGTTCTCGTCTTTCTTCTACTGTtcccacttcttcttcttcaaacccAGTTCGTTCTGTCTCGACTCGTTCTCGTGCATCTAGGACTCAGGAAGTATTACCTTCGACCAACTCTGTTCCGATGGACTCTACCAATGAATCGTCTGGGTCACGCCGTGATCGTCGTGGGAAGAATTTAGATAAGGACAATTCCGATAAAGGGAAAGAGAAGGAACATGATGTTAGGATTAGGGATAGAGACAGGGAAGGGGAGAGGAGGTTAGGGTTAAACATGGACAGTGGAGATGCTGGGGATGACGATGATAACGATAGTGAGGGTGGCGTGGGGATTTTGCATCAGAATTTGACAACTGCGAGTAGTGCACTTCAAGGGCTTCTTCGGAAACTTGGTGCTGGTCTGGATGATCTGCTTCCATCGGGAGCGATGGGTTCTGCATCTTCGTCCCACCAGAGTGGCAGGTTGAAGAAAATCCTATCTGGGTTGCGAGCAGATGGTGAAGAAGGTAGGCAGGTTGAGGCACTGACACAACTATGCGAAATGCTTTCTATTGGGACCGAAGAATCACTTAGTACATTCTCAGTTGATTCATTTGTTCCTGTGCTCGTTGGGTTGCTTAATCATGAGAGTAATCCTGATATCATGCTTCTCGCGGCCAGGGCGCTAACCCATCTCTGTGATGTCCTTCCTTCATCTTGTGCTGCCGTTGTGCATTATGGTGCAGTGTCATGCTTCTGCGCCCGGTTGCTTACAATAGAGTATATGGACTTAGCCGAGCAGTCTCTTCAAGCTCTGAAGAAGATATCTCAGGAGCACCCAACTGCCTGTCTACGAGCTGGTGCTCTTATGGCCGTACTCTCTTATTTGGATTTCTTCTCCACTGGAGTTCAGCGAGTTGCATTGTCTACTGCTGCTAATATGTGCAAGAAGCTTCCTTCAGATGCAGCGGACTTTGTGATGGAAGCTGTCCCTCTTCTGACAAACCTCCTTCAATATCATGATTCCAAGgTTCTGGAACATGCCTCTGTTTGTTTGACTCGAATTGCTGAAGCATTTGCATCATCTCCAGACAAATTGGATGAACTGTGCAATCACGGACTTGTTACACAAGCCGCTTCCCTTATTTCCACAAGCAATTCTGGAGGTGGGCAGGCTTCTCTTAGCACACCTACCTATACTGGTTTAATCCGACTACTTTCTACTTGTGCAAGTGGGTCTCCTCTTGGAGCTAAAACTTTACTTCTCCTTGGAATAAGTGGCATTCTAAAAGATATACTATCTGGTTCTGGAGTTTCTGCAAATTCCTCTGTATCACCTGCATTGAGTAGGCCACCTGAGCAGATATTTGAGATTGTGAACCTTGCGAATGAGCTTCTTCCCCCATTACCTCAAGGAATAATTTCCCTTCCAGTCAATTCGAACCTGTTCGTGAGAGGGTCTGTTGTGATAAAACCTCCCGCTAGCAGTTCTGCTCAGCAAGAAGACGCAAACGGGAATGTTCCTGAGATATCAGCTCGTGAGAAATTATTAAATGATCAGCCGGAGCTGCTTCAGCAAATTGGGATGGATCTCCTTCCAGTTTTAATACAGATCTATGGTTCCAGTGTCAATGGTCCTGTTCGGCACAAATGTCTTTCTGTCATCGGGAAATTGATGTATTTCAGCACAGCTGAGATGATCCAGTCATTGCTGAGACTGACAAATATATCGAgTTTTTTAGCTGGTGTCTTAGCATGGAAAGATCCACAAGTTTTGGTTCCTGCCTTGCAAATTGCGGAAATTCTTATGGAAAAACTTCCTGGGACATTCTCTAGGATGTTTGTGAGAGAGGGTGTTGTTCATGCAGTGGATCAACTTATTTTGGCTGGCAATTCAAGCAATAACTCTACACAAGCATCTTCTGCGGAGAAGGATAATGATTCTGTATCTGGAACCTCATCTCGCTCTCGGCGTTATCGTCGACGCAGTGGTAACTTAAATGCAGATGGAAATCCTTTGGAAGATGTGAAGAATCCTGCTTCGGTTAAAGTTGGTTCTCCTCCAACTTCTGTGGAAAATCCAACTATTAATTCTAGTCTTAAGGTGTCTGTTAGCTCAGCTGCTAGAGCTTTTAAAGATAAATACTTCCCTTCAGACCCTGGGGCTGTTGAAGTAGGTGTTACTGATGATCTTTTGCATCTGAAGAATCTTTGCATTAAGTTGACCTCTGGAGTTGACCAAAAGACTAAAGCCAAGGGGAAATCCAAGGCCTCTGGAAATGGGCTGGAAGATAATTCTGGAAATAAGGAGGAGTATTTGATTGGGGTGATATCAGAGATGCTAAAGGAACTCAGTAAAGGAGATGGTGTTTCTACTTTTGAATTTATTGGTAGTGGTGTCGTTGATTCTTTGCTGAACTATTTTTCTTGTGGGTACTTCTCTAAAGATAGAATCTCAGATGCTAACCTGGCCAAGCTTCGCCAACAAGCACTTAGAAGGTTTAAGTCTTTTACAGCTGTTGCTTTAGCTACCAGTACTAACAATGAGGTTGTCGCTCCTATGACTGTCTTGGTTCAGAAGCTTCAAAATGCTTTGTCTTCCTTAGAGCGTTTCCCAGTTGTGCTGAGCCATTCATCTAGGTCTTCTAGTGGAAGTGCTCGTCTCTCCTCAGGATTAAGTGCATTATCTCAACCCTTGAAGTTGCGTCTCTGTCGAGCCCAGGGTGAAAAGTCACTAAGGGATTATTCATCCAATGTTGTGCTGATTGATCCATTGGCAAGTTTAGCAGCTGTTGAAGAATTTCTTTGGCCACGCATACAACGTGGTGAATCTGGCCAGAAGCCTGCGATGCCTGCTGGGAATTCTGACTCTGTGACAACTCCTGCAGGAGCCGGTGTTTCATCTCCTGCTTCTACCCCTTCCTCTACTCGTCGATCCAGTAGACCCAGATCATCTGTTAATATAGGTGATACGCCTAGAAAAGAAATATCTCAAGATAAAAGCATGAGCTCATCTAAGGGTAAAGGTAAAGCTGTATTGAAGCCTGCACAGGAGGACACAAGAGGACCCCAAACCAGAAATGCTTCACGCAGAAGAGCAGTTCTTGATAAAGATGCTCAAATGAAGCCAGGAAATGGTGACTCTACTTCTGAGGATGAGGAACTGGATATATCACCTGTTGAGATTGATGAGGCTCTTGTTATTGAAGACGATGATATCTCAGACGATGAAGATGATGACCATGAAGATGTCCTAAGAGATGATTCTCTCCCTGTTTGCTTACCTGACAAAGTACATGATGTGAAGTTGGGTGACACAGCTGAGGAGAGCTCTATTGCCCCTGCAACAAGTGATAGCCAGACCAATGCAGCCTCAGGTTCTAGCAGCAAAGCTGCTACAGTCAAGGGTTCAGAATCAGCTGATTTTAGAAGCGGTTATTCTTCTAGTTCAAGAGGTGCAATGTCATTTGCTGCTGCTGCAATGGCTGGACTTGGATCTGCTAATAGCAGAGGTATTAGGGGTGGTAGAGATCGGCAAGGTCGCCCTTTGTTTGCTGGTCCAAATGATCCTCCAAGAATGATCTTTACTGTTGGTGGGAAGCAGCTTAATAGGCATTTGACTATATATCAGGCAATTCAAAGACAGCTTGTGctagatgaagatgatgatgagagGTTTGCTGGCAGTGATTTTGCATCCAGTGATGGTAGCAGGCTATGGGGTGATATTTACACTATCACATATCAGAGAGCAGAAAACCAAACAGATAGGGCCTCCACTGGAGCATCAAGTGCAAATACCTCAAAATCTGCCAAGTCTGGATCTGCATCAAATTCAGGTTCTGAAGCTAAGTTGCATCAGACTTCTGTTCTAGATAGTATATTGCAGGGAGAATTGCCCTGTGATTTGGAGAAATCTAATCCTACATATAATATTCTGGCATTATTGCGTGTCCTGGAGGGTTTGAACCACCTTGCGCCTCGATTGAGGGCCCAGATGACTACTGATAGTTTTGCTCAGGGAAAAATCTCAGATTTAGATGAGCTAGGTGTTACTATTGGTGCTAGAGTACCTTCAGAAGAATTTGTAAGCAGCAAGCTCACTCCAAAATTAGCTAGGCAAATTCAAGACGCCCTTGCATTATGCAGTGGGAGTCTTCCCTCATGGTGTTACCAGTTGACAAAAGCATGCCCCTTCTTGTTTCCTTTTGAGACCCGAAGGCAGTACTTTTATTCAACTGCCTTTGGCTTATCTCGTGCACTGTATCGCCTGCAGCAGCAGGGTGCTGATGGTCATGGATCTACAAATGAAAGAGAGTTAAGGGTTGGGAGACTCCGGCGCCAAAAGGTCCGTGTCTCCCGGAACCGCATTTTGGATTCTGCTGCGAAAGTAATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTGGAATATTTTGGTGAAGTTGGTACTGGATTGGGTCCCACCCTAGAGTTTTATACTCTTTTAAGCCATGATCTTCAAAAGGTTGGGCTACAAATGTGGAGATCAAATTCTTCAGAGAAACATTCAATGGAAATTGATGGATCTGGCCATAATTCTGCTGGTGATGGAGAAATTGTTAAATCTCCTCTTGGATTGTTTCCTCGGCCTTGGCCTCCATGTTCTGATGCATCAGAGGGTAGTCAGTTTTCTAAAGTGATTGAGTATTTCCGGCTATTGGGCCGTGTTATGGCTAAAGCGCTTCAAGATGGACGCCTTTTGGACCTACCATTATCACCAGCTTTTTATAAGCTTGTTCTTGGTCAAGAGCTTGATTTGCATGACATTCTTTCCATTGATGCTGAACTTGGAAAGACTTTGCATGAGTTAAATGCCCTTGTATGCCGAAAACATTATCTAGAGTCTACTTGTGGTAGCTATACTGATGCAATTTCTAACCTTCACTTTCGTGGGGCTCCAATTGAAGATATATGTTTGGATTTCACACTTCCTGGTTATCCAGATTACATCCTGAAACCTGTAGATGAAATCGTtgatattaataatttggaGGAGTACATATCTTTGGTGGTTGATGCAACTGTTAAGACTGgaatcatgcatcaaatggAGGCATTTAGAACAGGGTTTAATCAGGTTTTTGACATCTCATCTTTACAAATTTTTACTCCCCAAGAGCTGGACTATTTGCTTTGCGGCCGTAGAGAGTTGTGGGAGCCTGAGACACTTGCTGATCATATCAAGTTTGACCATGGATACACTGCCAAGAGCCCGGCCATAGTTAATTTACTTGAAATTATGGGAGAGTTCACACCAGAGCAGCAGCGTGCCTTCTGTCAATTCGTTACTGGTGCACCTAGGCTGCCACCTGGTGGGCTGGCAGTGCTCAATCCAAAACTGACTATTGTTCGAAAGCTTTCATCTACCACTGCCAGTGCTGCATCCAATGGGAATGGCCCTTCCGAATCGGTGGATGATGACTTGCCAAGTGTGATGACGTGTGCTAACTACCTGAAGCTTCCTCCTTATTCTACCAAGGAGATCATGTTCAAGAAGCTACTGTATGCAATCAGTGAAGGCCAGGGATCCTTTGATTTGTCATGA 5652 0.4414 METRSRKRAEASSAAPSSNTSGPTTRSSKRSRLSSTVPTSSSSNPVRSVSTRSRASRTQEVLPSTNSVPMDSTNESSGSRRDRRGKNLDKDNSDKGKEKEHDVRIRDRDREGERRLGLNMDSGDAGDDDDNDSEGGVGILHQNLTTASSALQGLLRKLGAGLDDLLPSGAMGSASSSHQSGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSANSSVSPALSRPPEQIFEIVNLANELLPPLPQGIISLPVNSNLFVRGSVVIKPPASSSAQQEDANGNVPEISAREKLLNDQPELLQQIGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLRLTNISSFLAGVLAWKDPQVLVPALQIAEILMEKLPGTFSRMFVREGVVHAVDQLILAGNSSNNSTQASSAEKDNDSVSGTSSRSRRYRRRSGNLNADGNPLEDVKNPASVKVGSPPTSVENPTINSSLKVSVSSAARAFKDKYFPSDPGAVEVGVTDDLLHLKNLCIKLTSGVDQKTKAKGKSKASGNGLEDNSGNKEEYLIGVISEMLKELSKGDGVSTFEFIGSGVVDSLLNYFSCGYFSKDRISDANLAKLRQQALRRFKSFTAVALATSTNNEVVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLSALSQPLKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAVEEFLWPRIQRGESGQKPAMPAGNSDSVTTPAGAGVSSPASTPSSTRRSSRPRSSVNIGDTPRKEISQDKSMSSSKGKGKAVLKPAQEDTRGPQTRNASRRRAVLDKDAQMKPGNGDSTSEDEELDISPVEIDEALVIEDDDISDDEDDDHEDVLRDDSLPVCLPDKVHDVKLGDTAEESSIAPATSDSQTNAASGSSSKAATVKGSESADFRSGYSSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRQGRPLFAGPNDPPRMIFTVGGKQLNRHLTIYQAIQRQLVLDEDDDERFAGSDFASSDGSRLWGDIYTITYQRAENQTDRASTGASSANTSKSAKSGSASNSGSEAKLHQTSVLDSILQGELPCDLEKSNPTYNILALLRVLEGLNHLAPRLRAQMTTDSFAQGKISDLDELGVTIGARVPSEEFVSSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQGADGHGSTNERELRVGRLRRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSNSSEKHSMEIDGSGHNSAGDGEIVKSPLGLFPRPWPPCSDASEGSQFSKVIEYFRLLGRVMAKALQDGRLLDLPLSPAFYKLVLGQELDLHDILSIDAELGKTLHELNALVCRKHYLESTCGSYTDAISNLHFRGAPIEDICLDFTLPGYPDYILKPVDEIVDINNLEEYISLVVDATVKTGIMHQMEAFRTGFNQVFDISSLQIFTPQELDYLLCGRRELWEPETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTTASAASNGNGPSESVDDDLPSVMTCANYLKLPPYSTKEIMFKKLLYAISEGQGSFDLS 1883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0975 1883 MobiDBLite consensus disorder prediction 654 674 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1275 1304 - -
Sto2g0975 1883 Gene3D Hect, E3 ligase catalytic domains 1409 1645 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 76 122 - -
Sto2g0975 1883 Pfam HECT-domain (ubiquitin-transferase) 1517 1883 IPR000569 GO:0004842
Sto2g0975 1883 SMART arm_5 214 255 IPR000225 GO:0005515
Sto2g0975 1883 SMART arm_5 297 337 IPR000225 GO:0005515
Sto2g0975 1883 SMART arm_5 340 378 IPR000225 GO:0005515
Sto2g0975 1883 CDD HECTc 1469 1878 IPR000569 GO:0004842
Sto2g0975 1883 SMART hect_3 1480 1883 IPR000569 GO:0004842
Sto2g0975 1883 MobiDBLite consensus disorder prediction 654 717 - -
Sto2g0975 1883 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 53 1883 - -
Sto2g0975 1883 Gene3D - 172 492 IPR011989 -
Sto2g0975 1883 SUPERFAMILY Hect, E3 ligase catalytic domain 1462 1876 IPR035983 GO:0004842
Sto2g0975 1883 MobiDBLite consensus disorder prediction 971 1013 - -
Sto2g0975 1883 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 53 1883 IPR045322 GO:0006511|GO:0061630
Sto2g0975 1883 MobiDBLite consensus disorder prediction 964 1112 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1131 1167 - -
Sto2g0975 1883 Gene3D Hect, E3 ligase catalytic domain 1755 1881 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1188 1213 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1071 1105 - -
Sto2g0975 1883 SUPERFAMILY ARM repeat 182 651 IPR016024 -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1 137 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 10 75 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1045 1059 - -
Sto2g0975 1883 MobiDBLite consensus disorder prediction 1128 1167 - -
Sto2g0975 1883 ProSiteProfiles HECT domain profile. 1583 1883 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0975 Sto-Chr2 8494049 8504416 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0975 K10590 - gmx:100783336 2876.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0975 2 8494049 8504416 Sto2g0975 2 8494049 8504416 ECH