Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0962 ATGAAAGTTTATGTGACTGATGAGAAGGAATTGATTATGGAGCCTTCTGTAAAATGGGCTGGAAATCCTAATATCACTGTTGCTGTTAAGGCGTTTGGGTTGAAAGCGACTGTCCAGGTGGTGGATTTGCAAGTCTTTGCTTTGCCTCGTATTACTTTGAAGCCCTTGGTTCCAAGCTTTCCTTGCTTTGCCAGCATCTACGTGTCTCTCATGGAAAAGCCACATGTTGACTTCGGATTAAAGCTTGTAGGCGCTGATCTCATGTCTATTCCTGGCCTTTACAGATTTGTTcagGAGCTTATTAAAACTCAGGTTGCAAATATGTATCTATGGCCCAAAACCTTGGAAGTTCCAATTATAGATCCATCAAAAGCCATGAAGAGGCCTGTTGGAATTCTCACTGCCAAGGTTCTGAGAGCAATGAAGCTAAAGAAGAAAGACCTTCTTGGTGCATCTGACCCTTATGTGAAACTGAAGCTTACTGAGGATAAGCTACCGTCGAAGAAGACTACTGTGAAGCACAAAAACTTGAATCCTGAATGGAACGAGGAATTTAATTTGGTGGTTAAAGATCCTGAATCGCAGGCTTTGGAGGTTATTGTTTATGACTGGGAGCAGGTTGGGAAGCATGAAAAGATGGGTATGAATGTAATTCCTTTAAAAGAACTTACTCCTGATGAGCCTAAAGATTTCACTCTCGAACTCCTAAAGAACATGGATGCCAATGATGCCCGAAATGAGAAATCACGCGGGCAGATTGTTGTAGAATTGACATATAAACCTTTCAAAGAGGAGGATATACCCAAGGGTTTTGAAGAGACACAGACTGTTGAAAAGGCTCCAGAAGGTACTCCTGCTGGTGGGGGTCTACTTGTGATTATAGTCCATGAAGCTCAAGATCTTGAAGGAAAGCACCACACCAATCCACAAGTACGCCTTATTTTCAGAGCGGAGGAGAAAAAGACTAAGCATGTGAAAAAGAACAGAGATCCTAGATGGGAAGAGGAGTTCTCATTTATGGTGGATGAGCCTCCCACTAATGAAAGATTACATGTGGAAGTTGTCAGCACCTCAGCACGCAGCATACTGCATCCAAAGGAATCTCTGGGTTATGTGGACATCAGTCTTGCCGATGTTGTCTCTAACAAGAGAATCAATGAAAAGTACCATCTCATAGATTCAAAGAATGGTCGCATCCAGATAGAGTTGCAATGGAGAACTTCATAA 1227 0.4222 MKVYVTDEKELIMEPSVKWAGNPNITVAVKAFGLKATVQVVDLQVFALPRITLKPLVPSFPCFASIYVSLMEKPHVDFGLKLVGADLMSIPGLYRFVQELIKTQVANMYLWPKTLEVPIIDPSKAMKRPVGILTAKVLRAMKLKKKDLLGASDPYVKLKLTEDKLPSKKTTVKHKNLNPEWNEEFNLVVKDPESQALEVIVYDWEQVGKHEKMGMNVIPLKELTPDEPKDFTLELLKNMDANDARNEKSRGQIVVELTYKPFKEEDIPKGFEETQTVEKAPEGTPAGGGLLVIIVHEAQDLEGKHHTNPQVRLIFRAEEKKTKHVKKNRDPRWEEEFSFMVDEPPTNERLHVEVVSTSARSILHPKESLGYVDISLADVVSNKRINEKYHLIDSKNGRIQIELQWRTS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0962 408 Gene3D C2 domain 290 407 IPR035892 -
Sto2g0962 408 CDD C2 133 235 - -
Sto2g0962 408 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 126 264 IPR035892 -
Sto2g0962 408 Pfam C2 domain 131 233 IPR000008 -
Sto2g0962 408 Pfam C2 domain 290 391 IPR000008 -
Sto2g0962 408 PRINTS C2 domain signature 148 160 IPR000008 -
Sto2g0962 408 PRINTS C2 domain signature 175 188 IPR000008 -
Sto2g0962 408 PRINTS C2 domain signature 197 205 IPR000008 -
Sto2g0962 408 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 1 120 IPR031468 GO:0008289
Sto2g0962 408 ProSiteProfiles C2 domain profile. 269 389 IPR000008 -
Sto2g0962 408 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 1 407 - -
Sto2g0962 408 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 3 120 IPR039010 -
Sto2g0962 408 Gene3D C2 domain 127 283 IPR035892 -
Sto2g0962 408 ProSiteProfiles C2 domain profile. 111 233 IPR000008 -
Sto2g0962 408 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 407 IPR045050 GO:0008289
Sto2g0962 408 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 289 406 IPR035892 -
Sto2g0962 408 SMART C2_3c 290 388 IPR000008 -
Sto2g0962 408 SMART C2_3c 132 232 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0962 Sto-Chr2 8350752 8355286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0962 129 387 Lipid Metabolism Gene Families AT3G61300 28.467 2.25e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0962 - - zju:107427497 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0962 2 8350752 8355286 Sto2g0962 2 8350752 8355286 ECH