Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0898 ATGGAGAAAGTCGTTTCAGGCAAGAGGAAGAAGAGCAGCGGAATTAATGGACAGGTTCTGGATGGTTCCAACATTATGGAGTTGGTTGGGAACCACCAAGTTTTCAGCGATTTCGTGGACCATAAGTTTCACGACTTGGACAGAGACGGAGATGGAAAGCTCTCGGTGAAGGAGCTCCAGCCTGCCATCGCCGATATCGGTGCCGCTCTCGGTTTGCCCACCCAGGGGACCAATCCGGAGTCCGATCATATCTACTCTGAGGTCTTGAATGAATTCACTCATGGTAAGGATGAGAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTCTCTGACATTCTATTGGGTATGGCTGCCGGGCTGAAGCGAGATCCGATTGTGATACTCCGAATCGATGGGGAAGATCTATTTGAATTTGTTAACGGCCCAGGTTATGAGCCCGAAATGGCATCCATATTCTTCGAGATCGAGTCCCCTAATGCATCACTCTGCAACTACATAATTGAAGCAATGGAGAAGCTCACTGTTGACCAAGGAATTCCTCCTACTTCTGATTCTTGGGTATTTAACAACATTGTGGAGCCTGCTCTACAATCTCAAGCCGGTCCTGATTGGGATGGACCTGTCTCTCAGGAGATATTTTTGGCAGAGTTTAAGAAAGTGGCTTTGAGAGTGGCTGAACATCTTAAGGAGCAACCTGTCATTGTTGCCCACAGCGAAAACACATTTGATGGAAATGGTGTTAAGAGGCTACTATCCAACAAGTTTGAATTAGAAAAGACCTTGAACTCCGCTCTGGAAAATCTGCCAAAAGATCGCAATGGAAAAATGTCAAAGGAGTATCTGCGGATTGCACTAGATGTGGTTTCTCCATCTGCTGGCTTACCTCCGTTTGGTGCAATTGCTGAGATGGATAATGTGATCGGCGAAGTGTTCAAGATGATAGGTGCAGATGATGGGAAAGTGGTTAAAGATGACGAATTCAAGAAGATTTTAACAGAGATACTGGGAAGTATAATGCTGCAGTTAGAGGGAAATCCCATATCAGTTTCTTCAAATTCAGTTGTGCACGAGCCCTTGAGCTCTTCTTCTACGCTTTTGCAGCCATCTTCTAATGAAACAGCATAA 1125 0.4533 MEKVVSGKRKKSSGINGQVLDGSNIMELVGNHQVFSDFVDHKFHDLDRDGDGKLSVKELQPAIADIGAALGLPTQGTNPESDHIYSEVLNEFTHGKDEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLFEFVNGPGYEPEMASIFFEIESPNASLCNYIIEAMEKLTVDQGIPPTSDSWVFNNIVEPALQSQAGPDWDGPVSQEIFLAEFKKVALRVAEHLKEQPVIVAHSENTFDGNGVKRLLSNKFELEKTLNSALENLPKDRNGKMSKEYLRIALDVVSPSAGLPPFGAIAEMDNVIGEVFKMIGADDGKVVKDDEFKKILTEILGSIMLQLEGNPISVSSNSVVHEPLSSSSTLLQPSSNETA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0898 374 SUPERFAMILY EF-hand 42 345 IPR011992 -
Sto2g0898 374 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 6 373 - -
Sto2g0898 374 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 6 373 - -
Sto2g0898 374 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Sto2g0898 374 Coils Coil 247 267 - -
Sto2g0898 374 Pfam EF-hand domain pair 42 108 IPR002048 GO:0005509
Sto2g0898 374 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Sto2g0898 374 SMART efh_1 306 334 IPR002048 GO:0005509
Sto2g0898 374 SMART efh_1 260 288 IPR002048 GO:0005509
Sto2g0898 374 SMART efh_1 38 66 IPR002048 GO:0005509
Sto2g0898 374 Gene3D - 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0898 Sto-Chr2 7788223 7793379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0898 18 373 EF-hand Containing Proteins AT4G38810 66.852 3.48e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0898 - - gmx:100820516 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0898 2 7788223 7793379 Sto2g0898 2 7788223 7793379 ECH