Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0875 atgggTTTCCGTTTACCCGGTCTCAAAAAGACTTCATTTACTGCCAGCCAAGGAGCTTCAAAATCTGTGGAAGTCCCAAAGGGGTATGTTGCAGTGTATGTTGGGGAGAAGATGAAGCGTTTTGTGATCCCAATATCATACTTGAACCAACCTTCATTTCAAGAATTACTGAACCAAGCTGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCATGTAGGGAGGATGTGTTCTTAGATATTACTTCTCGCTTGAATGGagaaacaaaagaaatgggTTTTCGTTTACCCGGTATCAAAAAGGCTTCGAAATCTATGGAAGTCCCAAAGGGGCATGTCGCAGTATATGTTGGAGAGAAGATGAAGCGTTTTGTAATCCCCATATCATGCTTGAACCAACCTTTGTTTCAAGAATTACTTAACCAAGCTGAAGAAGAATTCGAATATTATCATCCAATGGGTGGTCTCACAATTCCATGCAAGGAAGAGTTGTTCTTAGATATCACTTCTCGCTTGAATGCGCTATAA 540 0.3889 MGFRLPGLKKTSFTASQGASKSVEVPKGYVAVYVGEKMKRFVIPISYLNQPSFQELLNQAEEEFGYDHPMGGLTIPCREDVFLDITSRLNGETKEMGFRLPGIKKASKSMEVPKGHVAVYVGEKMKRFVIPISCLNQPLFQELLNQAEEEFEYYHPMGGLTIPCKEELFLDITSRLNAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0875 179 Pfam Auxin responsive protein 106 175 IPR003676 GO:0009733
Sto2g0875 179 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
Sto2g0875 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 90 IPR003676 GO:0009733
Sto2g0875 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 105 177 IPR003676 GO:0009733
Sto2g0875 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 105 177 - -
Sto2g0875 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 3 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0875 Sto-Chr2 7619954 7622283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0875 14 82 Calmodulin-binding Proteins AT3G43120 49.275 8.78e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0875 - K14488 aip:110269930 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0875 2 7619954 7622283 Sto2g0875 2 7619954 7622283 ECH