Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0809 atgagtcttcttcttcttcttgttctgaTCGGCGGCGGAATGTTCGGTTCCGGCGTCGTCGCGCACGATTACGGCGACGCATTGTCGAAGTCGATCTTGTTCTTCGAAGGCCAGCGGTCCGGCGTGCTGCCTCAGGACCAGAAGATGAGCTGGCGCGCCGATTCCGGCCTCAGCGACGGCTGGACCTACAACACCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGATTCCCGATGGCCTTCACCACCACAATGCTGGCCTGGAGCGTCGTCGAGTTTGGGGAAAATATGCCTCCCAACGAGCTCAGGAACGCCTTGGTCGCGATTCGTTGGGCCACTGATTATCTTCTCAAGACCGTTTCGCAGCCGAATCGCATTTTCGTTCagGTGGGTGATCCAAGCATAGACCACAATTGTTGGGAGAGGCCAGAGGACATGGACACAGCCAGAACAGTTTATGCGGTTGATGCACCAAACCCGGCTTCTGACGTGGCGGGTGAGACCGCCGCGGCACTGGCAGCTGCGTCAATTGCATTCCGGTCGTCGGACCCGGGATACTCTGAAACATTGCTGAGAAATGCAGTGAAGGCCTTCCAATTTGCTGATAGCTACAGAGGTGCTTATAGTGACAATGCTAATATTAAGGATGGTGCCTGCCCTTATTATTGCGATTTTGGTGGCTATCAGGACGAGTTGTTATGGGGAGCAGCATGGCTAAGGAGGGCCACACAAGACGATAGTTTTCTGAATTACATACAGAGCAATGGCAAAACCCTTGGTGCTGATGACAACATCAATGAATTTGGTTGGGACAACAAGCATGCTGGTCTTAATGTTCTTGTCTCCAAGGAAGTATTAGAAGGAAACATGTACTCCCTAGCTTCCTACAGAGCCTCAGCCGAGAGCTTCTTATGCACCCTAATCCCCGAATCCCCAAGCTCACAGTCCCACATCGACTACTCCCCGGGAGGCCTCATCTACCGTCCAGGTGGCAGCAATCTCCAGCACGCAACCTCCATCTCCTTCCTCCAACTCGTCTACGCCAACTACCTCTCTCGCACCTCACAATCCCTCACCTGTGGAAATCTCTATGTTACCCCTCAGACCCTTCGCCAGCAAGCCAAGAGACAGGTGGACTACATCCTAGGGTCCAACCCTTTGGGACTGTCCTACATGGTAGGGTACAGCAACTATTTCCCTCAACGCATCCACCATCGTGGGTCCTCCTTGCCTTCCATTAAGGACCACCCTCAGTTCATTGCGTGCAAAGAAGGGTCCTTCTATTTCAACTCCTCGAGCCCTAACCCTAATGTGCTCGTGGGAGCTGTGGTGGGAGGGCCAGGTCAGGATGATGCGTTTGTGGATGACCGAGCGGATTTTCGTAGGACTGAGCCTACTACGTATATTAATGCCCCTTTTGTTGGGGTTCTGGCTTACTTTGTGGGTAACCCTAATTGA 1473 0.5255 MSLLLLLVLIGGGMFGSGVVAHDYGDALSKSILFFEGQRSGVLPQDQKMSWRADSGLSDGWTYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVVEFGENMPPNELRNALVAIRWATDYLLKTVSQPNRIFVQVGDPSIDHNCWERPEDMDTARTVYAVDAPNPASDVAGETAAALAAASIAFRSSDPGYSETLLRNAVKAFQFADSYRGAYSDNANIKDGACPYYCDFGGYQDELLWGAAWLRRATQDDSFLNYIQSNGKTLGADDNINEFGWDNKHAGLNVLVSKEVLEGNMYSLASYRASAESFLCTLIPESPSSQSHIDYSPGGLIYRPGGSNLQHATSISFLQLVYANYLSRTSQSLTCGNLYVTPQTLRQQAKRQVDYILGSNPLGLSYMVGYSNYFPQRIHHRGSSLPSIKDHPQFIACKEGSFYFNSSSPNPNVLVGAVVGGPGQDDAFVDDRADFRRTEPTTYINAPFVGVLAYFVGNPN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0809 490 Gene3D - 20 488 IPR012341 GO:0005975
Sto2g0809 490 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Sto2g0809 490 PANTHER ENDO-1,4-BETA-GLUCANASE 18 490 - -
Sto2g0809 490 SUPERFAMILY Six-hairpin glycosidases 22 487 IPR008928 GO:0005975
Sto2g0809 490 PANTHER ENDOGLUCANASE 24 18 490 - -
Sto2g0809 490 Pfam Glycosyl hydrolase family 9 24 482 IPR001701 GO:0004553|GO:0005975
Sto2g0809 490 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 458 476 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0809 Sto-Chr2 6998503 7003741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0809 3 485 Glycoside Hydrolase AT1G70710 60.663 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0809 K01179 - cit:102631193 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0809 2 6998503 7003741 Sto2g0809 2 6998503 7003741 ECH