Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0782 TTGATCCGGCAGGTGGTCGACGGCGGCGACGTCGACGACCTTCGCTTGGGCGCGGAGCATCACTTTTCTCTGTTCAAGGATAGGTTCGGGAAGTCGTACTCTTCGAAGGAAGAGCACGATTACAGGTTCAAGGTATTTAAGGCTAACTTGCGCCGAGCTCAGCGGCACCAGAAGTTGGATCCGTCGGCAGTTCATGGCGTGACTCAGTTCTCCGATTTGACGCCGTCCGAGTTTCGGAAGACTGTTTTAGGTCTCAGAGGCCTCAGGTTGCCTGCAGATGCAAACAAGGCTCCGATATTGCCGACCGATGATCTTCCGCAGGACTTTGATTGGAGAGATCGTGGTGCTGTTACTGCTGTCAAGAATCAGGGTTCATGTGGATCATGTTGGAGTTTCAGCACAACTGGAGCCTTGGAAGGTGCACACTTCCTCGCTACAGGAAATCTTGTCAGCCTTAGCGAACAGCAGCTTGTGGATTGCGATCATGAGTGTGATCCAGAAGAACAAGGTTCTTGTGACTCCGGGTGCAACGGCGGATTGATGAATAGTGCTTTTGAATACATCCTCAAATCTGGTGGTATCATGCGGGAAGAAGACTACCCTTATACTGGCTCTGATCGAGGGACCTGCAAATTCGACAAGACTAAGATTGCAGCATCAGTGGCAAACTTCAGTGTTGTCTCGCTTGATGAGGACCAGATTGCTGCTAATCTTGTGAAAAATGGCCCTCTTGCAGTGGCCATCAATGCAGCATATATGCAGACATATGTTGGAGGAGTATCATGCCCATACATTTGTGCAAGGCGGTTAGACCACGGTGTGTTACTGGTGGGATTTGGTTCTGCTGGCTATGCCCCAATTCGGTTCAAAGAGAAGCCATATTGGATTATTAAGAATTCATGGGGAGAGAATTGGGGAGAGAATGGATACTATAAGATTTGCAGGGGACGCAATGTTTGTGGGGTGGACTCTATGGTTTCAACTGTGGCCGCCGTTCACACCACTTCTCAGTAG 1014 0.497 LIRQVVDGGDVDDLRLGAEHHFSLFKDRFGKSYSSKEEHDYRFKVFKANLRRAQRHQKLDPSAVHGVTQFSDLTPSEFRKTVLGLRGLRLPADANKAPILPTDDLPQDFDWRDRGAVTAVKNQGSCGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDCDHECDPEEQGSCDSGCNGGLMNSAFEYILKSGGIMREEDYPYTGSDRGTCKFDKTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAAYMQTYVGGVSCPYICARRLDHGVLLVGFGSAGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAAVHTTSQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0782 337 PRINTS Papain cysteine protease (C1) family signature 123 138 IPR000668 GO:0006508|GO:0008234
Sto2g0782 337 PRINTS Papain cysteine protease (C1) family signature 272 282 IPR000668 GO:0006508|GO:0008234
Sto2g0782 337 PRINTS Papain cysteine protease (C1) family signature 294 300 IPR000668 GO:0006508|GO:0008234
Sto2g0782 337 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 12 331 - -
Sto2g0782 337 CDD Peptidase_C1A 106 329 IPR039417 -
Sto2g0782 337 PANTHER CYSTEINE PROTEASE RD19C-RELATED 12 331 - -
Sto2g0782 337 SUPERFAMILY Cysteine proteinases 20 329 IPR038765 -
Sto2g0782 337 Gene3D Cysteine proteinases 4 330 - -
Sto2g0782 337 SMART Inhibitor_I29_2 22 78 IPR013201 -
Sto2g0782 337 SMART pept_c1 105 330 IPR000668 GO:0006508|GO:0008234
Sto2g0782 337 Pfam Papain family cysteine protease 105 328 IPR000668 GO:0006508|GO:0008234
Sto2g0782 337 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 270 280 IPR025660 -
Sto2g0782 337 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 123 134 IPR000169 -
Sto2g0782 337 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 294 313 IPR025661 -
Sto2g0782 337 Pfam Cathepsin propeptide inhibitor domain (I29) 22 78 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0782 Sto-Chr2 6686034 6688139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0782 K01373 - gmx:100812198 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0782 2 6686034 6688139 Sto2g0782 2 6686034 6688139 ECH