Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0753 ATGGTGAAGGACACTACGTACTACGACATATTAGGTGTTAAAGTCGATGCATCCCCTGGAGATATCAAGAGGGCTTACTATGTCaagGCAAGGATAGTTCACCCAGATAAAAATCCTGGAGATCCCAGGGCTGCTGAAAATTTTCAGGTACTTGGTGAGGCTTACCAGGTTTTAAGTGATCCTGAAAAGCGTGAAGCATATGATAAAAATGGAAAGGCGGGAGTAGCACAAGACTCCATGATGGATCCAGCATCTGTATTTGGGATGCTTtttggaagtgaatattttgaagattatattggagaacttgcaTTGGCTGCTTTAGCATCTATAGAAGTTGAGGAAGACTCACACGATCCTGAAACGCGTAAACAAATTGTTCaagaaaagataaaaGCTTGGCAGAATGAAAGGGAACAAAAGCTCATTGCAACTCTGAAAGATCGCCTGCAACCATTTGTTGATGGTCGAATGGATGAATTTACAACATGGGCAAATTCAGAAGCAAGTCGCCTTTCTCAAGCTGCTTTTGGAGAGGCCATGCTGCATACAATTGGTTATATTTACACACGAAAAGCCACAAAAGAACTTGGAAAGGATATGAGGTATATGAAGGTTCCTTTTCTGGCAGAGTGGGTAAGAGGAAAAGGTCACCTGATAAAGTCACAAGTAATGGCAGCTTCAGGTGCTGTGTCTCTAATTCAAATACAAGAAGACCTGAAGAAGCTTAACGACGGAGAAGCCAAAGAAGAAAACGTATTAAAAGCTATTGAAGATAAGAAGGATGCTATGGTTAATTCCCTTTGGCAGATCAATGTGGTCGATATTGAAACAACTTTGTCACATGTCTGCCAAGCTGTCCTTAGAGATCCTAGTGTCTCTAAAGATGTTTTGAAAGAACGGGCTAAAGGCTTGAAGAAGTTGGGAACCATCTTCCAAGGTGCTAAGGCTGCTTACAGTAGAGAAAACAGTCTACGCCATGAAGGTATCAAAACAGGAGATGCTGCTTCATCGTCCTAG 1020 0.401 MVKDTTYYDILGVKVDASPGDIKRAYYVKARIVHPDKNPGDPRAAENFQVLGEAYQVLSDPEKREAYDKNGKAGVAQDSMMDPASVFGMLFGSEYFEDYIGELALAALASIEVEEDSHDPETRKQIVQEKIKAWQNEREQKLIATLKDRLQPFVDGRMDEFTTWANSEASRLSQAAFGEAMLHTIGYIYTRKATKELGKDMRYMKVPFLAEWVRGKGHLIKSQVMAASGAVSLIQIQEDLKKLNDGEAKEENVLKAIEDKKDAMVNSLWQINVVDIETTLSHVCQAVLRDPSVSKDVLKERAKGLKKLGTIFQGAKAAYSRENSLRHEGIKTGDAASSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0753 339 Coils Coil 240 260 - -
Sto2g0753 339 Gene3D DnaJ domain 1 87 IPR036869 -
Sto2g0753 339 Pfam DnaJ domain 6 68 IPR001623 -
Sto2g0753 339 PANTHER BNAA01G05380D PROTEIN 1 329 - -
Sto2g0753 339 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 329 - -
Sto2g0753 339 Pfam X-domain of DnaJ-containing 135 322 IPR026894 -
Sto2g0753 339 CDD DnaJ 6 60 IPR001623 -
Sto2g0753 339 SUPERFAMILY Chaperone J-domain 2 99 IPR036869 -
Sto2g0753 339 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto2g0753 339 PRINTS DnaJ domain signature 26 41 IPR001623 -
Sto2g0753 339 PRINTS DnaJ domain signature 43 63 IPR001623 -
Sto2g0753 339 PRINTS DnaJ domain signature 63 82 IPR001623 -
Sto2g0753 339 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Sto2g0753 339 SMART dnaj_3 5 63 IPR001623 -
Sto2g0753 339 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0753 Sto-Chr2 6449719 6455329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0753 7 69 Miscellaneous Gene Families AT1G16680 47.761 3.57e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0753 - - gmx:100778323 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0753 2 6449719 6455329 Sto2g0753 2 6449719 6455329 ECH