Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0744 ATGGCTAGTGATTCTTCTGTAATTTCCAACGGCAATGTTAGTTCACAACATAATCAGAGGATGTACCAAGTGGTAGTGGCTGCAACCCGGGATATGGGTATTGGTAAGGATGGAAAATTACCCTGGAAATTACCTTCTGATCTCAAATTTTTTAGAGAGATCACTATGGCAACATCTGATCCTGGGAAGAAGAATGCAGTTTTAATGGGTAGAAAAACATGGGAGAGTATCCCTCTTAAGAATCGGCCTCTTCCTGGTCGTCTTAATGTTGTTCTGACTCGCTCAGGAAGCTTTGATATTGCAACTGCAGAGAATGTTCTTATTTGTGGAAGCCTATCTTCTGCTTTAGAATTGTTAGCTGCTTCTCCTTACTGTCTGTCAACTGAGAAAGTATTTGTTATAGGAGGTGGCCAGATATTCagAGAGGCTGTTAATGCACCAAGATGTGAAGCTATCCACATTACAGAAATTGAGACAAGCATTGAGTGTGACACTTTTATGCCTCCAATTGACTCATCTGTATTCCGCCCATggtactcatcttttcccaagGTAGAGAACAACATACGCTATTCTTTCGCCACTTATGTGCGTGTGAGGGGTGCTGCAGCGGACCCCCAGATTCAGAATGCTGAAACTAATTTTGATACTGGATCAGATGCTATAAAATTTGAAGTCAATAAATTCCTTTTCCTCCCTAAAATGATTTTTGAGAGACACGAGGAGTACATGTATCTTAAACTAGTTCAAGAAATCCTCTCTGAAGGCAATTGTAAGGATGATAGGACGGGGACGGGTACCTTATCAAAATTTGGTTGCCAGATGAGATTCAATCTGCGCAGAAGCTTTCCTCTTCTAACAACTAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGTTCAACAAATGCGAAGGTGCTGCAGGAAAAAGGCATCCATATATGGGATGGCAATGCATCTAGAGAATACCTTGATAGTATTGGTTTGACAGATAGGGAGGAGGGTGATTTAGGACCTGTATATGGGTTCCAATGGAGGCACTTTGGTGCTAGGTATACAGGCATGCATTCTGACTACACTGGCCAAGGATTTGATCAGCTTTTAGATGTTATTAACAAGATAAAGAATAATCCTGATGATCGACGGATTATTCTCTCTGCATGGAACCCAGCTGATCTTCAATTGATGGCACTTCCACCCTGTCACATGTTTGCACAGTTCTATGTAGCACATGGGGAGTTATCCTGCCAAATGTATCAGCGATCTGCTGACACGGGTCTGGGTGTGCCATTTAATATTGCGTCTTATGCCCTTCTGACATGCATGATTGCTCATGTTTGTGAACTTGTTCCTGGTGATTTTGTCCATGTCATTGGTGATGCACATGTTTACCGCAATCATGTGAGACCTTTACAGGAGCAGCTCCAGAACCTGCCAAGACCTTTTCCTACTTTGAAGATAAAGTCAAAGAAGGACATAGAGTCGTTTGTGGCTGCTGATTTTGAACTCATAGGATATGATCCTCACCAGAAGATAGAAATGAAGATGGCTGTGTAG 1575 0.4146 MASDSSVISNGNVSSQHNQRMYQVVVAATRDMGIGKDGKLPWKLPSDLKFFREITMATSDPGKKNAVLMGRKTWESIPLKNRPLPGRLNVVLTRSGSFDIATAENVLICGSLSSALELLAASPYCLSTEKVFVIGGGQIFREAVNAPRCEAIHITEIETSIECDTFMPPIDSSVFRPWYSSFPKVENNIRYSFATYVRVRGAAADPQIQNAETNFDTGSDAIKFEVNKFLFLPKMIFERHEEYMYLKLVQEILSEGNCKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASREYLDSIGLTDREEGDLGPVYGFQWRHFGARYTGMHSDYTGQGFDQLLDVINKIKNNPDDRRIILSAWNPADLQLMALPPCHMFAQFYVAHGELSCQMYQRSADTGLGVPFNIASYALLTCMIAHVCELVPGDFVHVIGDAHVYRNHVRPLQEQLQNLPRPFPTLKIKSKKDIESFVAADFELIGYDPHQKIEMKMAV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0744 524 ProSitePatterns Thymidylate synthase active site. 387 415 IPR020940 GO:0004799|GO:0006231
Sto2g0744 524 Hamap Thymidylate synthase [thyA]. 242 524 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 Pfam Dihydrofolate reductase 23 198 IPR001796 GO:0004146|GO:0046654
Sto2g0744 524 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 220 524 IPR036926 -
Sto2g0744 524 CDD TS_Pyrimidine_HMase 245 478 IPR023451 -
Sto2g0744 524 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 21 198 IPR001796 GO:0004146|GO:0046654
Sto2g0744 524 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 524 - -
Sto2g0744 524 CDD DHFR 25 197 IPR001796 GO:0004146|GO:0046654
Sto2g0744 524 Pfam Thymidylate synthase 244 524 IPR023451 -
Sto2g0744 524 Gene3D Dihydrofolate Reductase, subunit A 6 200 IPR024072 -
Sto2g0744 524 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 233 524 IPR036926 -
Sto2g0744 524 PRINTS Thymidylate synthase family signature 283 304 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 PRINTS Thymidylate synthase family signature 376 395 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 PRINTS Thymidylate synthase family signature 402 417 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 PRINTS Thymidylate synthase family signature 420 446 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 PRINTS Thymidylate synthase family signature 458 475 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 TIGRFAM thym_sym: thymidylate synthase 244 524 IPR000398 GO:0004799|GO:0006231
Sto2g0744 524 PANTHER THYMIDYLATE SYNTHASE 1 1 524 IPR045097 GO:0016741
Sto2g0744 524 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 33 55 IPR017925 GO:0004146
Sto2g0744 524 PIRSF DHFR-TS 4 524 IPR012262 GO:0004146|GO:0004799|GO:0006730
Sto2g0744 524 SUPERFAMILY Dihydrofolate reductase-like 16 198 IPR024072 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0744 Sto-Chr2 6368777 6372374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0744 K13998 - qsu:111986005 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0744 2 6368777 6372374 Sto2g0744 2 6368777 6372374 ECH