Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0743 ATGCTCCTCCGCTCCCTCGCTCGCGACTACCTCCCCGCCGACTTCCACCACTACATCCACTCCAAATTGCGGGAACTCCTCACCGCGTTCTCTCCCCAATTCGTCCTCATCATCGACGAATTCGAGGGTCTCACCTATAATCTGCTATACAAATCGGCAGAAGTGTATCTCAGACCCCAAATCGCTCCCAACACTACAAGGTTCAGAGTCATCATGCCCAAGAAGGAGGAGAAGGTGTCTGTGGTAATGGAGAGGAACCAAGAAATCGTTGATTCCTTCAATGGGGTTCGATTCGTATGGAAAATGGTGTCCAAACAGATTCCATCTCTGTACATTCCCACCCCAGGATCAGGAAGGCACCACTCCACTCTGAAATCTGAGCTTAGATACTACGAATTGTGTTTCAATAAAAAGCACAAGGATATGGTTTTTTCCGAGTATTTGCCATATGTCATGGAGAAAGCCAAGGAGGTGAAGGAAGAGAGGAAGACACTGAAGCTTTTCACTCTGAAAAAAGATAGGTTTCATGGAAGGCGTGGGGATATGTGGCAATCTGTGAATCTTGATCATCCTTCAACTTTTGATACATTGGCTATGGATTTGGAAGCAAAGAAAGGGATCATGGAGGATTTGGATAGGTTTGTGCAGACGAAGAGTTTCTATAGGAAAGTGGGGAAGGCATGGAAACGTGGGTATTTGCTGTTTGGACCTCCAGGAACAGGGAAATCTAGCTTGATTGGTGCAATGGCAAATTATCTGAATTTTGATATATATGACTTGGAGCTCACTGATCTTAGAAGTAATACTGAGCTGAGGAAGTTGTTGATTTCTACTGGGAATAGATCCATACTTGTGGTGGAAGATATTGATTGCTCTCTTCAGCTTCAGGATAGACTTGCAAAACCAgcagcagaagaagaagaacccaTGGCTGCAATGCCCTCCCCATTTCATCCATTTGAAGACCAAAAACCAAAGGTGACTCTATCAGGATTGCTGAATTTCATAGATGGATTATGGTCAAGTTGTGGGGATGAGAGGATCATAGTGTTCACAACGAATCACAAAGACAGATTAGACCCTGCTCTGTTGCGACCAGGTCGAATGGATGTGCACATACACATGTCATACTGCACCCCAGGTGGGTTCAAAACCTTAGCTTGCAATTACCTGGGAATCTCAGAACACCCACTTCTTGTTCAAGTTGAAAACTTGATGCATACCACCAATGTCACTCCTGCTGAAGTGGCTGAACAGTTGCTGAAACATGAGGAGGAGGACTCTGAAATTGCACTCAGAAGCCTCATGGAGTTTCTCAGAGACAAGGGAGGAAAAAGCCATGAATCTGAGGATCTCAGTACTATGTAA 1368 0.4415 MLLRSLARDYLPADFHHYIHSKLRELLTAFSPQFVLIIDEFEGLTYNLLYKSAEVYLRPQIAPNTTRFRVIMPKKEEKVSVVMERNQEIVDSFNGVRFVWKMVSKQIPSLYIPTPGSGRHHSTLKSELRYYELCFNKKHKDMVFSEYLPYVMEKAKEVKEERKTLKLFTLKKDRFHGRRGDMWQSVNLDHPSTFDTLAMDLEAKKGIMEDLDRFVQTKSFYRKVGKAWKRGYLLFGPPGTGKSSLIGAMANYLNFDIYDLELTDLRSNTELRKLLISTGNRSILVVEDIDCSLQLQDRLAKPAAEEEEPMAAMPSPFHPFEDQKPKVTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIHMSYCTPGGFKTLACNYLGISEHPLLVQVENLMHTTNVTPAEVAEQLLKHEEEDSEIALRSLMEFLRDKGGKSHESEDLSTM 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0743 455 Pfam Domain associated at C-terminal with AAA 11 103 IPR025753 -
Sto2g0743 455 PANTHER BCS1 AAA-TYPE ATPASE 1 449 - -
Sto2g0743 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 425 IPR027417 -
Sto2g0743 455 SMART AAA_5 228 379 IPR003593 -
Sto2g0743 455 ProSitePatterns AAA-protein family signature. 347 365 IPR003960 GO:0005524|GO:0016887
Sto2g0743 455 CDD AAA 229 377 - -
Sto2g0743 455 PANTHER - 1 449 - -
Sto2g0743 455 Gene3D - 182 373 IPR027417 -
Sto2g0743 455 Gene3D - 374 440 - -
Sto2g0743 455 Pfam ATPase family associated with various cellular activities (AAA) 233 376 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0743 Sto-Chr2 6361117 6366870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0743 208 373 Miscellaneous Gene Families AT5G53170 29.518 5.22e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0743 K08900 - jre:108986998 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0743 2 6361117 6366870 Sto2g0743 2 6361117 6366870 ECH