LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g0730	ATGGCTTCTGCGTGTGTGAGCTTCAAAGCCAATGCTCATTTTGCGATAACACGAAGAGATCATCATCGTTTTGGTCAAGATAGTGCGATTTGGGGGGAAAGAATCAAAGGAAGCGTGAATAGTGGTATGTGTGTGAATCGGATGAGGAAGACGAAACCTGCTGGTGTTGTCTCAGCGGTTCTTACTTCGAATAATGCTCAGGAATCCGTGGGCTTACAAGTATCGTCGTTCGTCCGCCGGAGGGCGGACCCGAAAAATGTAGCTGCCGTCGTATTGGGAGGAGGCCCTGGGACTCAACTCTTTCCTCTCACCCAACGATGTGCGACACCAGCTGTCCCAGTTGGTGGATGTTATAGACTAATAGACATCCCAATGAGCAATTGCATCAATAGTGGCATTAACAAAATCTTTGTGCTGACCCAGTTTAACTCTGCATCTCTGAACCGTCACATCTCCTACACCTATTTGGGAAATGGCATTAACTTTGGGGATGGATTTGTGGAGGTTCTAGCAGCCACTCAAACAGCAGGAAAAACAGGAAAGCAGTGGTTCCAAGGAACTGCAGATGCTGTGAGACAATTTACCTGGGATGCCAAGAACAAAAGTATTGACAATGTATTGATTTTGGCGGGGGATCATCTATACCGAATGGATTACGTTGACCTTGTGCAGAGTCACGTTGACAGAAATGCTGATATTACAATTTCGTGTGCTGCAGTGGATGACAGCCGTGCATCTGATTATGGATTGGTCAAGGTAGATGGCAGAGGTCGCATCATCCAATTTTCAGAAAAACCCAAGGGTCTTTATTTGAAGGAAATGCAAGTAAATACCTCTCTTATTGGGTTGTCACCACAAGATGCTGTAAAATCACCATATATTGCATCCATGGGGGTTTATGTATTCAAGACAGATGTTTTACTCGAGCTTCTTAAATTGAGATATCCCACTTCCAATGACTTTGGATCCGAAATCATTCCCGCAGCTCTTAGGGAACATGATGTCCAAGCATTTTTCTTCAGAGACTACTGGGAAGACATTGGAACGATAAAGTCCTTTTACAATGCTAACCTAGCTCTTACAGAAGAGAATccaaagtttaaattttatgaCCCCAAGACACCCATTTACACATCTCCTCGATTCCTACCACCAACATCGGCTGAAAATTGTCGGATTGTGAATGCAATTATCTCCCATGGATGTTTCCTGCGATCATGTACAGTCCAACATTCCATTGTTGGTGTACGTTCACGTCTAGATCGTGGCGTTGAGCTTCAGGACACTGTTATGTTGGGAGCAGACGATTACCAAACGGAATCTGAAATTGCTTCTCTGCTAGCTGAGGGGAAGGTCCCAATTGGTATTGGAAGGAATACCAAAATTAGGAACTGTATAATTGACAAGAATGTGAAGATCGGGAAAGATGTCATCATCATGAACAAGGATGGAGTTCAAGAAGCAGATAGGCCAGAAGAGGGATTTTACATTCGGTCTGGAATCACCATCATAATGGAGAAGGCAACGATAGAAGATGGCAAGATCATATGA	1551	0.4365	MASACVSFKANAHFAITRRDHHRFGQDSAIWGERIKGSVNSGMCVNRMRKTKPAGVVSAVLTSNNAQESVGLQVSSFVRRRADPKNVAAVVLGGGPGTQLFPLTQRCATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHISYTYLGNGINFGDGFVEVLAATQTAGKTGKQWFQGTADAVRQFTWDAKNKSIDNVLILAGDHLYRMDYVDLVQSHVDRNADITISCAAVDDSRASDYGLVKVDGRGRIIQFSEKPKGLYLKEMQVNTSLIGLSPQDAVKSPYIASMGVYVFKTDVLLELLKLRYPTSNDFGSEIIPAALREHDVQAFFFRDYWEDIGTIKSFYNANLALTEENPKFKFYDPKTPIYTSPRFLPPTSAENCRIVNAIISHGCFLRSCTVQHSIVGVRSRLDRGVELQDTVMLGADDYQTESEIASLLAEGKVPIGIGRNTKIRNCIIDKNVKIGKDVIIMNKDGVQEADRPEEGFYIRSGITIIMEKATIEDGKII	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g0730	516	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC	1	516	-	-
	Sto2g0730	516	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	88	480	IPR011831	GO:0005978\|GO:0008878
	Sto2g0730	516	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	183	191	IPR005836	GO:0005978\|GO:0008878
	Sto2g0730	516	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	516	IPR011831	GO:0005978\|GO:0008878
	Sto2g0730	516	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	295	305	IPR005836	GO:0005978\|GO:0008878
	Sto2g0730	516	CDD	ADP_Glucose_PP	89	347	-	-
	Sto2g0730	516	CDD	LbH_G1P_AT_C	384	510	-	-
	Sto2g0730	516	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	93	112	IPR005836	GO:0005978\|GO:0008878
	Sto2g0730	516	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	72	381	IPR029044	-
	Sto2g0730	516	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	85	477	IPR029044	-
	Sto2g0730	516	Pfam	Nucleotidyl transferase	89	362	IPR005835	GO:0009058\|GO:0016779
	Sto2g0730	516	SUPERFAMILY	Trimeric LpxA-like enzymes	379	516	IPR011004	-
	Sto2g0730	516	Gene3D	Hexapeptide repeat proteins	382	516	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g0730	Sto-Chr2	6239339	6244434	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g0730	K00975		-	gmx:100808791	835.099

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g0730	2	6239339	6244434	Sto2g0730	2	6239339	6244434	ECH