Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0728 ATGGGGAAGGCGAAGGGAAAGCATCGTTTGGATAAGTTCTACCACTTAGCCAAAGAACATGGCTATAGATCCAGGGCCTCATGGAAGCTTGTCCAGCTCGATTCCAAATTCCGCTTTCTCGAATCCGCTCACGCCGTCCTCGACCTTTGTGCGGCGCCCGGTGGGTGGATGCAGGTCGCCGTGCAGCGCATGCCCATCAATCACCTCGTTATTGGTGTGGATTTGGCTCCCATCGCGCCCATCAGAGGCGCCATTGCTATCCAGGAGGATATCACGAAACCGGAGTGCAAGGCGAGGATTAAGAAGTTGATGAATGAGAATGGGTGTCAGGCGTTTAATGTGATTTTGCATGACGGGTCGCCCAATATTGGTGGAGCATGGGCTCAGGAAGCCATGACTCAGAACGCTTTGGTAATTGATTCGGTGAAGTTGGCCACGCAGTTTTTAGCTCCTAAGGGTATATTTGTCACTAAGGTTTTCAGGTCACAAGATTATAGTGCTGTCTTGTATTGCTTAAAGCAGTTATTTGAAAAAGTTGAGGTGGATAAACCAGCAGCCAGTCGTTCTGAATCTGCAGAAATATATGTTGTGGGTCTTAAGTATAAGGCCCCAGCAAAGATTGATCCACGTCTTCTTGATGTGAAGCATTTGTTTCAGGGGTCAGTAGAACCTCAGACAAAGGTGGTGGATGTTCTTAGAGGAACGAAGCAAAAGAGACATCGTGGCGGTTATGAAGATGGAGACACAACTTTAAGGAAGGTATCTTCAGCTGCAAATTTCATTTGGTCAGATAATCCTCTTGAGATCCTTGGCTCAGTCACTTCCATTACCTTTAGTGATCCagatgatttaaaaattaaggaTCATGACTTAACGACAGAAGAGGTCAAAGCACTATGCGATGATATCCGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGGATTCACATAAGAAAAGCTTTATCACAAACTGAAAAGACTGATGCTGTTACAAccaaaaaagttgaaaatgagAATAAGGAGGATGACGATGATAAACTACTCAATGAAATGGAGGAGCTGACACATGCAATGGACCGCAAGAAGAAACATGAAAAGAAGCGTCTTGCAAAAAGAAGAGCTAAGGACAAGGCACGAAAAGCAACTGGGATGCAAATTGATGCATTAGAAGATGGTTACATTGATCATGAGTtgttctctctttcttctattaaGGGTAAGAAGGATCTTGCAGCTGTTGATACCACTGAATATGAAGGTGACGAGGATGTAGCAGGGGATAGTGATGATgaagaaaaagatgatgaagatCAAGAGCATTCATCATGTGACATAGAGGATTCTGATGAAGAACGGAGAAGATATGATGAACACATGGAAGAGTTGCTTGATCAAGCTTATGAGCGGTTTGTGTCCAAGAAGGAAGGAACTGCAATGCAGCGGAAGCGTAGAAAGAAATCCTATGATGCAGATAACGATCTTTTGGAGGATGGAGAGGCTGATGATGTTGTTCAGTCTAAGTATGACTCTGATGAAGAGCAGGGTGTTCAAGAAGCAAATCCTCTTATGGTACCTCTTGATGAAGGGTTAGAGCCCACCCAAGAGGAGGTAATGAATAAATGGTTTAGTCAGGATATCTTTGCTGAAGCTGTAGAGGAAGGAGACCTTGGAAAGCATGATAGTGAAGATGACATGGATATAGATGGGGATAAGGAAAAGCCTTCTACTGCAAAAAaggcaaaagaaaataaaactaaagCTTCTGCTGGAATGGATAACCTTAAATCTCAAGCATCTAAGGTAGAGGATGATTTTGAAATAGTTCCCGCTCCTGCTACAGATTCAAGTGACGATTCATCCTCAGATGAATCAGAGGATGACAATACCAAAGCTGAGATATTAGCTTGTGCAAAGAAGATGCTGAGGAAAAAGCATCGCGAACAGCTACTGGACGATGCATACAATAAGTACATGTTTGATGATGAGGGGTTGCCTAAATGGTTCCTTGAGGAAGAAAGAAGGCACCGCCAACCAATAAAGCCCGTGACCAAGGAGGAAATTGCAGCAATGAAAGCACAGTTTAAAGAAATTGATGCTCGGCCCGCCAAGAAGGTTGCAGAGGCCAAAGCACGAAAGAAACGAGCTGCAATGAGGAAACTTGAGAAGGTGCGAAAGAAGGCCAATGCTATATCGGATCAGGCAGACATATCTGATCGATCCAAGACGAAGCAAATTGAGCAACTATATAAGAGGGCTACCCCAAAGAAGCCTAAGAAGGAATATGTTGTTGCAAAGAAAGGTGTACAAGTTAAGACTGGCAAGGGGAAAGTCCTTGTTGACCGGAGGATGAAGAAGGATCTTAGAAAGCGCGGAACAGGTAAACCCGGAAAAGGCAAGAAGAATGTCAAAGCTCAGAAGGGAAAAGGATCTTCAAAGCCTTCCTCTGCCAAGAAgggaagaaaggaaaagaaagcacCATAG 2493 0.4232 MGKAKGKHRLDKFYHLAKEHGYRSRASWKLVQLDSKFRFLESAHAVLDLCAAPGGWMQVAVQRMPINHLVIGVDLAPIAPIRGAIAIQEDITKPECKARIKKLMNENGCQAFNVILHDGSPNIGGAWAQEAMTQNALVIDSVKLATQFLAPKGIFVTKVFRSQDYSAVLYCLKQLFEKVEVDKPAASRSESAEIYVVGLKYKAPAKIDPRLLDVKHLFQGSVEPQTKVVDVLRGTKQKRHRGGYEDGDTTLRKVSSAANFIWSDNPLEILGSVTSITFSDPDDLKIKDHDLTTEEVKALCDDIRVLGKQDFKHLLKWRIHIRKALSQTEKTDAVTTKKVENENKEDDDDKLLNEMEELTHAMDRKKKHEKKRLAKRRAKDKARKATGMQIDALEDGYIDHELFSLSSIKGKKDLAAVDTTEYEGDEDVAGDSDDEEKDDEDQEHSSCDIEDSDEERRRYDEHMEELLDQAYERFVSKKEGTAMQRKRRKKSYDADNDLLEDGEADDVVQSKYDSDEEQGVQEANPLMVPLDEGLEPTQEEVMNKWFSQDIFAEAVEEGDLGKHDSEDDMDIDGDKEKPSTAKKAKENKTKASAGMDNLKSQASKVEDDFEIVPAPATDSSDDSSSDESEDDNTKAEILACAKKMLRKKHREQLLDDAYNKYMFDDEGLPKWFLEEERRHRQPIKPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRAAMRKLEKVRKKANAISDQADISDRSKTKQIEQLYKRATPKKPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDLRKRGTGKPGKGKKNVKAQKGKGSSKPSSAKKGRKEKKAP 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0728 830 MobiDBLite consensus disorder prediction 720 830 - -
Sto2g0728 830 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Sto2g0728 830 MobiDBLite consensus disorder prediction 556 634 - -
Sto2g0728 830 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 801 IPR028589 GO:0008649|GO:0031167
Sto2g0728 830 Coils Coil 449 469 - -
Sto2g0728 830 Pfam Spb1 C-terminal domain 604 794 IPR012920 GO:0005634|GO:0006364|GO:0008168
Sto2g0728 830 PANTHER RRNA METHYLTRANSFERASE-RELATED 1 801 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 726 769 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 504 518 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 419 526 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 360 385 - -
Sto2g0728 830 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Sto2g0728 830 MobiDBLite consensus disorder prediction 556 592 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 449 497 - -
Sto2g0728 830 Coils Coil 581 601 - -
Sto2g0728 830 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Sto2g0728 830 Coils Coil 341 361 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 420 448 - -
Sto2g0728 830 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Sto2g0728 830 Coils Coil 707 737 - -
Sto2g0728 830 MobiDBLite consensus disorder prediction 791 810 - -
Sto2g0728 830 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 1 801 - -
Sto2g0728 830 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Sto2g0728 830 MobiDBLite consensus disorder prediction 365 382 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0728 K14857 - gmx:100790741 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0728 2 6224921 6230183 Sto2g0728 2 6224921 6230183 ECH