Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0715 ATGAGTTCCGGCGGAGTCCAGATCCAGAACCCGACCCGGAAACTCCCGGACTTCCTACAGAGCGTGAATCTCAAGTACGTCAAACTCGGATACCATTACCTGATGACTCATCTCCTGACCCTCCTCCTGATCCCTCTCGCGTCCGCCATTTTCGTCCAAGCCTCCCAGACGGATCTCGAGGATTTGCGCGCGCTCTGGCTCCACCTCCAGTACAATCTCCTCACCGTCATCGTCTTCTCCGCCTTCCTCGCCTTCGGATCTACCGTCTACATCATGACCCGGCCCAGATCCGTCTACCTCGTCGACTTCTCCTGCTACGTCCCGCCGCCGCACCTGCAGGTGAAGTTCGGGCAATTCATGGAGCACTCGAAGCTCACCGGCGATTTCGACGATTCGTCCCTGGAATTCCAGAGGAAGATTCTGGAAAGGTCGGGGCTCGGGGAGGAGACGTACGTCCCGGAGGCTATGCATTCGATCCCGCCGCGGCCGTCGATGGCGGCGGCGAGGGAGGAGGCGGAGCAAGTGATGTTCGGAGCACTGGACAATCTCTTCGCAAACACGAAgGTAAAAGCGAAAGACATCGGAATCCTGGTGGTGAATTGCAGCCTCTTCTGCCCGACGCCGTCGCTATCGGCGATGATCGTGAACAAGTACAAGCTGCGAGGGAACATAAGGAGCTTCAATCTGGGCGGCATGGGTTGTAGTGCGGGCGTGATAGCCTTGGATCTGGCGAAGGAGATGCTTCAGGTTCATCGGAACACGTATGCCGTCGTGGTCAGCACCGAGAACATAACGCAGAACTGGTACTTCGGGAACCGGAAATCCATGCTCATTCCGAACTGCCTCTTCCGCGTCGGCGGGTCGGCCATCTTGCTGACGAACAAGGGGTCGGAGAAGAAGAGGGCCAAGTACAAGCTGGTTCATGTGGTGAGGACGCACAAGGGAGGAGATGATAAGGCGTTCAAGTGTGTGTATCAGGAGGAAGACGATGATGGCAAAACAGGGGTCTCTCTCTCTAAGGATCTCATGGCCATTGCAGGTGGAGCATTGAAGACGAACATCACCACACTAGGCCCTCTGGTCCTCCCAATCAGCGAGCAGCTCCTCTTCTTCCTAACCCTAATGTCCAACAAGCTCTTCAACGCCAAGCTCAAACCCTACATCCCCGACTTCAAGCTCGCCTTCGACCACTTCTGCATCCACGCCGGCGGCCGCGCCGTCATCGACGAGCTCGAGCGCAACCTCCAGCTCCTCCCGCACCACGTCGAGGCCTCCCGGATGACCCTGCACCGATTCGGAAACACCTCGTCGAGCTCGATCTGGTACGAATTGGCCTACACGGAAGCCAAAGGGAGGATCAAGAGAGGGAATCGTGTCTGGCAGATCGCGTTCGGGAGCGGATTCAAGTGCAATAGCGCCGTGTGGAAGGCGCTTCGGAATGTGAAGGCGTCGCCGAAGAATCCGTGGGAGGAGTGTGTGTATCGCTTGATATCTGAGTTCATTACAGGACATGGTGAAACCACAAAACCCATTACTGTTGCCACGGCTTCTGCCGCTCATCGAAGCTTGATATCTGAGTTCATTACAGGACATGGTGAAACCACAAAACCCATTACTGTTGCCACGGCTTCTGCCGCTCTATGA 1644 0.5639 MSSGGVQIQNPTRKLPDFLQSVNLKYVKLGYHYLMTHLLTLLLIPLASAIFVQASQTDLEDLRALWLHLQYNLLTVIVFSAFLAFGSTVYIMTRPRSVYLVDFSCYVPPPHLQVKFGQFMEHSKLTGDFDDSSLEFQRKILERSGLGEETYVPEAMHSIPPRPSMAAAREEAEQVMFGALDNLFANTKVKAKDIGILVVNCSLFCPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIALDLAKEMLQVHRNTYAVVVSTENITQNWYFGNRKSMLIPNCLFRVGGSAILLTNKGSEKKRAKYKLVHVVRTHKGGDDKAFKCVYQEEDDDGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFLTLMSNKLFNAKLKPYIPDFKLAFDHFCIHAGGRAVIDELERNLQLLPHHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRIKRGNRVWQIAFGSGFKCNSAVWKALRNVKASPKNPWEECVYRLISEFITGHGETTKPITVATASAAHRSLISEFITGHGETTKPITVATASAAL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0715 547 PANTHER 3-KETOACYL-COA SYNTHASE 4 8 495 - -
Sto2g0715 547 PANTHER 3-KETOACYL-COA SYNTHASE 8 495 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto2g0715 547 SUPERFAMILY Thiolase-like 85 299 IPR016039 GO:0016746
Sto2g0715 547 CDD CHS_like 80 475 - -
Sto2g0715 547 Gene3D - 118 477 IPR016039 GO:0016746
Sto2g0715 547 SUPERFAMILY Thiolase-like 307 476 IPR016039 GO:0016746
Sto2g0715 547 PIRSF Very_long_ch_3-ktacl-CoA_syn 17 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto2g0715 547 Pfam FAE1/Type III polyketide synthase-like protein 90 379 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto2g0715 547 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 395 476 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0715 Sto-Chr2 6108177 6120742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0715 12 493 Miscellaneous Gene Families AT1G19440 81.743 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0715 K15397 - egr:104418843 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0715 2 6108177 6120742 Sto2g0715 2 6108177 6120742 ECH