Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0708 ATGGCGGAAGAAGCAATCCTTAGTTACCTTGAAAAAGGCCATGAAATTTCAGATTCTGGTCAGTTTGCTTCTGAGCGTGGAATTGATCACAATGAAATCGTCAATGTCATCAAGAGCCTCCATGGATTTCGATATGTCGATGCTGAGGACATTAAAAGGGAGACTTGGGTCCTAACAGATGAGGGGAAGGCTTATGCTGCTAAGGGATCACCAGAAGTGCAACTGTTTTTGGCCATACCTCCAGAGGGTATCTCTAAAGAAGAACTTCAGAAAAAGCTAGAACCCACAGCCTTCAAAATAGCTTGTGCTCAGGCTGCAAAGAATAAATGGGTGGAGATGGGAAAACAACTTATATCTAGAAAGGTCGAGAAGGTTGAAGACAGAGTCAAAGATTTGCTTCTAAAAATACAAGAGGGACAGGTTATTGGTTCAGAAGATATTAAGGCTCTCAAAGGACGAAAGCTTATTGTTCCACAGACATGGAAGGGCTACTCTGTGAAAAAGGGACCTAACTATGCtccaagaagaaagaaagttgTCACTGATTTAACACGAGATAATTTCCAGagTGGTGAGTGGAAAGAATTAGAGTTCAAAGAGTACAACTACACTGCTAAAGGTCAGCCTCTTGAAGGTGGCCATCTTCATCCACTGCTGAAGGTACGATATCAACTAAAAAAGATTTTCCTCTGTATGGGGTTTGAGGAGATGCCAACAAACAATTTTGTCGAAAGCAGCTTCTGGAACTTTGACGCATTGTTCCAGCCCCAACAGCACCCAGCCCGTGATTCTCATGACACATTCTTTTTGCAAGCTCCTTCAACTACAAAGGAACTTCCAGAAGATTATGTTCAGAGGGTAAAGGATATTCATGAATCTGGTGGTTATGGATCTAGGGGATATGTTTATGACTGGAAAAGAGAGGAAGCAAACAAAAACCTCCTGCGAACCCACACAACTGCTGTTTCCTCTAGGATGCTTTACCAACTGGCACAGAAACCTTTttctccaaaaaaatatttctctATTGATCGTGTATTTAGGAATGAAGCAGTTGATCGAACTCATCTTGCTGAGTTCCACCAGATTGAAGGTCTTGTATGTGATCGAGGACTCACTCTCTGTGATTTGATAGGAGTTCTGCACGATTTTTTCTCGCGATTGGGCATGAACAAGCTGAAGTTCAAACCTGCTTATAATCCATACACTGAACCTAGCATGGAAATTTTCAGTTATCATGAGGGCTTCAAAAAATGGGTTGAAGTAGGAAACTCTGGCATGTTCAGACCTGAGATGTTGCGTCCTATGGGACTTCCTGAAGATGTCCAAGTTATTGCATGGGGGCTTTCCCTTGAAAGGTAA 1362 0.4119 MAEEAILSYLEKGHEISDSGQFASERGIDHNEIVNVIKSLHGFRYVDAEDIKRETWVLTDEGKAYAAKGSPEVQLFLAIPPEGISKEELQKKLEPTAFKIACAQAAKNKWVEMGKQLISRKVEKVEDRVKDLLLKIQEGQVIGSEDIKALKGRKLIVPQTWKGYSVKKGPNYAPRRKKVVTDLTRDNFQSGEWKELEFKEYNYTAKGQPLEGGHLHPLLKVRYQLKKIFLCMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLQAPSTTKELPEDYVQRVKDIHESGGYGSRGYVYDWKREEANKNLLRTHTTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLIGVLHDFFSRLGMNKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLRPMGLPEDVQVIAWGLSLER 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0708 453 Gene3D - 71 125 - -
Sto2g0708 453 Gene3D - 7 199 - -
Sto2g0708 453 SUPERFAMILY Class II aaRS and biotin synthetases 201 453 IPR045864 -
Sto2g0708 453 Pfam PheRS DNA binding domain 3 70 125 IPR040725 -
Sto2g0708 453 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 225 453 IPR006195 -
Sto2g0708 453 PANTHER PHENYLALANYL-TRNA SYNTHETASE 3 453 - -
Sto2g0708 453 Coils Coil 115 135 - -
Sto2g0708 453 PANTHER PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT 3 453 - -
Sto2g0708 453 Gene3D Bira Bifunctional Protein; Domain 2 216 453 IPR045864 -
Sto2g0708 453 TIGRFAM pheS: phenylalanine--tRNA ligase, alpha subunit 170 453 IPR004529 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Sto2g0708 453 Gene3D - 58 156 - -
Sto2g0708 453 CDD PheRS_alpha_core 216 453 - -
Sto2g0708 453 Pfam tRNA synthetases class II core domain (F) 201 453 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Sto2g0708 453 Pfam PheRS DNA binding domain 1 3 56 IPR040724 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0708 K01889 - gmx:100792325 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0708 2 6060215 6066824 Sto2g0708 2 6060215 6066824 ECH