Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0699 atgGCTCAGCCGTTCGTGAAGAAAGACGATGACCGAGATGATGAAGCCGAGTACTCTCCCTTTCTGGGAATTGAAAAGGGGGCTGTTCTCCAGGAAGCCAGGGTTTTTAATGATCCACAACTAGATGCTAGGAGATGTTCACAGGTCATCACAAAACTTTTATACCTACTGAATCAAGGAGAGTCATTTACAAAGACCGAGGCCACGGAAGTTTTCTTTGCTGTCACTAAGCTTTTCCAGTCTAAAGATATTGGATTAAGGAGAATGGTCTATCTGATGATAAAGGAGATCTCTCCCTCTTCAGATGAGGTTATTATCGTCACAAGCTCTCTCATGAAGGACATGAATAGTAAGACTGATATGTATAGGGCAAATGCCATTCGTGTGCTTTGTCGTATTACGGATGGAACCCTTCTTACCCAGATTGAGCGGTATTTGAAACAAGCTATTGTAGATAAGAATCCAGTTGTTGCAAGTGCAGCCCTTGTTAGCGGAATACACATACTCCAGACAAATCCTGAAATAGTAAAAAGGTGGAGCAACGAGGTTCAGGAAGCTGTTCAATCAAGAGCAGCTCTTGTACAGTTTCACGCATTGGCTTTGCTACAACAGATAAGGCAGAATGATCGGCTAGCTGTGAGCAAGTTGGTTACCAGCTTGACTAGGGGAACTGTACGCTCACCTTTAGCCCAATGTCTTTTGATCCGTTACACAAGTCAGGTgtgttttgttttcGTAATTCGTGAGTCAGGCAATAATTCACAGACAGGGGATCGCCCCTTCTATGATTACCTTGAGAGTTGCCTTCGTAACAAGTCAGAGATGGTGATTTTTGAAGCTGCCAGAGCTATTACAGAGCTCAATGGTGTTACGAACAGAGAATTAACTCCAGCAATTACTGTTCTCCAACTCTTCTTAAGTTCTTCTAAGCCTGTCTTAAGATTTGCTGCTGTCCGAACCTTGAACAAGGTGGCTATGACACACCCAATGGCTGTCACCAACTGCAATATTGATATGGAAAGTTTAATTTCTGACCAAAACAGAAGCATTGCTACGCTTGCAATAACTACCCTTTTGAAGACAGGAAATGAGTCAAGTGTAGATCGTCTTATGAAGCAGATTACAAATTTCATGTCAGATATTGCTGATGAATTCAAAATTGTTGTGGTTGAAGCAATAAGATCCTTGTGCTTAAAGTTTCCCTTGAAATATCGATCTCTGATGAACTTCTTGAGTAACATTCTCAGGGAAGAAGGTGGATTTGAGTACAAGAAGGCAATTGTTGATTCAATTGTAATTCTCATTAGAGATATCCCTGAAGCAAAGGAGAGTGGGCTGCTTCATCTTTGTGAGTTCATTGAAGACTGTGAATTCACCTATTTGTCTACACAGATACTCCATTTCCTGGGAATTGAAGGGCCAAAAACATCTGACCCCAGCAAATATATACGTTACATATATAACAGAGTACATCTTGAGAATGCAACTGTCAGGGCAAGTGCTGTGAGCACACTGGCCAAGTTTGGTGCCTTAGTTGATGTGTTAAAGCCGCGTATATTTGTTCTGCTAAGGCGATGCCTTTTTGACAGTGatgatgagGTTCGTGATAGGGCAACACTTTATCTGAATACACTTGGAGGTGACGGTGTTGTTGTTGAGACAGACAAAGCTGTTAAGGACTTTCTTTTTGGGTATTTTGATATCCCACTTGTCAATCTGGAAACTAGTTTGAAAAATTATGAGCCTTCAGAAGAACCTTTTGACATTAACTCAGTGCCCAAGGAAGTTAAATCTCAGCCACTTGCAGAGAAGAAAGCCCCAGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGACCTCCATCAACTGCAGATGCATATGAAAGGCTGCTTTCCTCCATTCCTGAGTTTGCAAACTTTGGAAAGCTCTTTAAGTCATCAGCACCTGTGGAGCTTACTGAAGCTGAGACTGAATATGCAGTTAATGTTGTTAAACACATTTTTGATAGTCATGTTGTGTTCCAGTACAACTGCACAAACACAATACCAGAGCAATTACTGGAAGATGTTACTGTAATTGTTGACGCTTCTGAAGCAGAAGAATTTTCTGAGGTGTTCTCCAAGCCTCTCAGGTCTCTGCCTTATGATTCACCAGGACAGACATTTGTGGCATTTGAGAAGCCCGAGGGGCTGCCAACAGTTGGAAAATTCTCCAATATTCTGAAATTTTTTGTTAAAGAGGTTGACCCAGCCACTGGTGAGGCAGAAGATGATGGGGTTGAAGATGAATACCAGCTGGAGGATTTGGAGGTTGTTCCAGCTGATTACATGTTGAAAATGGGAGTGTCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGATTGTGAGCGAGTGGATGAATATGGTCTGGGCCCTAGGGACAGCTTGGCTGAAGCTGTAAATACTGTCATCAATATTCTTGGCATGCAGCCTTGTGAGGGCACAGAGGTGGTCCCGCCCAATTCAAGGTCACACACATGCGTATTGTCAGGTGTATACATAGGAAATGTCAGGGTTCTTGTGAAGTTGTCTTTCGGACTTGATGGTCCAAAAGATGTGGCAATGAAATTAGCTGTTAGATCCGAGGATGAAACCGTCAGCGATGCCATTCATGAGATCGTGGCTAGCGGCTAG 2679 0.4252 MAQPFVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGESFTKTEATEVFFAVTKLFQSKDIGLRRMVYLMIKEISPSSDEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLQQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVCFVFVIRESGNNSQTGDRPFYDYLESCLRNKSEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPEAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTLAKFGALVDVLKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGVVVETDKAVKDFLFGYFDIPLVNLETSLKNYEPSEEPFDINSVPKEVKSQPLAEKKAPGKKPTGLGAPPSGPPSTADAYERLLSSIPEFANFGKLFKSSAPVELTEAETEYAVNVVKHIFDSHVVFQYNCTNTIPEQLLEDVTVIVDASEAEEFSEVFSKPLRSLPYDSPGQTFVAFEKPEGLPTVGKFSNILKFFVKEVDPATGEAEDDGVEDEYQLEDLEVVPADYMLKMGVSNFRNAWESMGPDCERVDEYGLGPRDSLAEAVNTVINILGMQPCEGTEVVPPNSRSHTCVLSGVYIGNVRVLVKLSFGLDGPKDVAMKLAVRSEDETVSDAIHEIVASG 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0699 892 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 777 889 IPR009028 GO:0006886|GO:0016192|GO:0030117
Sto2g0699 892 Gene3D - 23 321 IPR011989 -
Sto2g0699 892 PIRSF Gamma-COP 7 890 IPR017106 -
Sto2g0699 892 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 775 889 IPR032154 -
Sto2g0699 892 PANTHER COATOMER SUBUNIT GAMMA 1 892 - -
Sto2g0699 892 MobiDBLite consensus disorder prediction 597 625 - -
Sto2g0699 892 Gene3D Coatomer, gamma subunit, appendage domain 622 773 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Sto2g0699 892 Gene3D - 775 890 IPR012295 -
Sto2g0699 892 Pfam Coatomer gamma subunit appendage platform subdomain 627 772 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Sto2g0699 892 PANTHER COATOMER SUBUNIT GAMMA 1 892 IPR017106 -
Sto2g0699 892 Pfam Adaptin N terminal region 29 545 IPR002553 GO:0006886|GO:0016192|GO:0030117
Sto2g0699 892 SUPERFAMILY Clathrin adaptor appendage domain 622 776 IPR013041 -
Sto2g0699 892 SUPERFAMILY ARM repeat 29 584 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0699 Sto-Chr2 5946533 5954902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0699 K17267 - gmx:100789362 1626.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0699 2 5946533 5954902 Sto2g0699 2 5946533 5954902 ECH