Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0692 ATGGTAGCTCCAGCCATCTCCTCAGTACCTGCGACTGCGAGCTTCTCTATCGCTTCTCGCAATGGAAATTCGTCCAACCTCTTTCACTCCCACAGAAACCACTTGTCGATAGCGTCCTCCTTGCCAAGCCCGTATGGGGACTCATCGAAAATTGGATTATCAAGTAAAAGCCGTGGATTTCCTTTAAGACTTGATGAGAAAAATACTCATGATGCAAGTACAAGTTATGGCGTTATAGAAGCCAGAAAGGGGAATCCACCCATAATGCCAGCAGTGATGACTCCAGGAGGAGCTGTGGATCTTTCATCTGTATTGTTCCGAAATCGTATAATTTTCATTGGACAGCCAGTCAACTCACAAGTGGCTCAGAGAGTTATATCGCAGCTTGTGACGTTGGCTTCTATTGATCAGAAAGCAGATATACTGGTGTATATAAACTGCCCCGGTGGAAGCACATATTCAGTGTTGGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTATGTTTTGGAGTAGCTGCAAGCCAAGGAGCGCTTCTCCTTGCTGGGGGAGAGAAAGGGATGCGTTATGCAATGCCAAATGCACGAATAATGATACATCAACCTCAGAGTGGATGTgggGGTCATGTAGAAGACGTGAGACGCCAAGTAAATGAAGCTGTTCAAACTCGCCATAAAATTGACAAGATGTATGCTGCTTTTACCGGTCAGCCATTAGAGAAGGTGCAACAGTACACTGAGAGGGACCGGTTTCTGTCCGTCTCTGAGGCTTTGGAGTTTGGTCTTATTGATGGTGTTCTGGAAACGGAGTACTGA 828 0.4517 MVAPAISSVPATASFSIASRNGNSSNLFHSHRNHLSIASSLPSPYGDSSKIGLSSKSRGFPLRLDEKNTHDASTSYGVIEARKGNPPIMPAVMTPGGAVDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLASIDQKADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQTRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0692 275 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 15 275 - -
Sto2g0692 275 Pfam Clp protease 98 273 IPR023562 -
Sto2g0692 275 PRINTS Clp protease catalytic subunit P signature 100 115 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 PRINTS Clp protease catalytic subunit P signature 140 160 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 PRINTS Clp protease catalytic subunit P signature 171 188 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 PRINTS Clp protease catalytic subunit P signature 192 211 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 PRINTS Clp protease catalytic subunit P signature 249 268 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 SUPERFAMILY ClpP/crotonase 99 273 IPR029045 -
Sto2g0692 275 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 15 275 IPR023562 -
Sto2g0692 275 CDD S14_ClpP_2 100 270 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 88 274 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto2g0692 275 ProSitePatterns Endopeptidase Clp histidine active site. 193 206 IPR033135 -
Sto2g0692 275 Gene3D - 79 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0692 Sto-Chr2 5878208 5881266 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0692 K01358 - gmx:100799710 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0692 2 5878208 5881266 Sto2g0692 2 5878208 5881266 ECH