Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0676 ATGGATATTGATTTCAAGGATTTTCAGTTACGCTGTGAACTTCCAGGCCATGAAGATGATGTTCGTGGAATTTGTGTGTGTGGCAATGAGGGTATAGCAACATCGTCCAGGGATAGAACTGTTAGGTTCTGGTCTCTGGACCCATCGGACAAGCGCAAATTCATGTCTTCGAAAATTTTGTTGGGGCATACGAGTTTTGTGGGGCCGTTGGCTTGGATTTCGCCGAATGAGAACTTTCCCGAAGGTGGAATTGTGTCCGGTGGCATGGACACTCTTGTGTTGGTCTGGGACTTGAAGACGGGGGAGAAGGTGCAGACACTCAGGGGTCATCAGTTACAGGTTACTGGCATTGCATTGGATGATGGGGATATTGTATCATGTTCTGTTGATTGTAATTTAAAACGGTGGAGGAATGGGCAACCTGTAGAAAATTGGGAGGCTCATAAGGCAGCTATTCAAGCAGTTATAAAGCTACCGTCAGGCGAGCTCGTTACTGATACTGTTCGAGGCTTGGCTTTGATGTCTGATCTTGGAATTCTTTCTGCATCACATGATGGTTCTCTCAGATTATGGGCGGTAAGCGGTGAAGTGCTAATGGAGATGGTTGGTCATACTGCAATTGTTTATTCTGTTGACTCGCATGCATCAGGACTTATTGTCAGTGGCAGCGAAGATCGTTATGCAAAAATATGGAAAGATGGAGTTTGTGTTCAGAGCATAGAGCATCCCGGTTGTGTTTGGGATGCAAAATTTCTGGAAAATGGGGATATTGTGACAGCATGTTCAGATGGAGTTGTACGTATTTGGACTGCTCATCAAGATTATGTTGCTGACCCACTAGAGCTTGATTTATACACTTCAGAACTTTCTCAATACAAGTCTAGTAGAAAGAGGGTTGGAGGACTGAAATTGGAAGAGTTACCAGGCTTAGAGGCATTAAAGATCCCAGGAACTAGTGATGGGCAGACAAAAGTAGTCAGAGAGGGGGATAATGGGGTAGCATATGCGTGGAACATGGGAGAACAGAAGTGGGACAAAGTATTTCCTTTACTCTTAATGCTTCGTAATGATACAAATCGCCCTATCCTTGATGGTACTCAGTATGATTATGTGTTTGATGTGGATATTGGAGACGGTCTTCCTATTCGTAAGTTGCCATACAACCGATCAGATAATCCATATGATACTGCTGACAAATGGCTTCTCAAGGAGAACCTTCCCCTGTCCTTCCGTGAGCAAATTGTACAGTTCATACTTCAAAATACTGGACAAAAGGATATTACTTTTGATGCAGCATTTCGTGATCCCTATACTGGCTCCAGTGCTTACGTACCTGGCCAACCTTCAAACTCTGTAGTTTCTGCAAAACCTACTTTCAAGCATATCCCTAAGAAAGGGATGCTTGTTTTTGATGCAGCTCAGTTTGATGGGATCCTTAAAAAGATCACTGAATTCAATAATGCTTTACTCTCTGACCAGGAAAAGCAGAATCTGGCTTTAACTGAGCTTGATGTTTCCAGACTGGGTGCTATTGTTAAAATTCTGAAGGATACTTCACATTATCATTCTAGTAAATTTGCAGATGCTGATATAGCCTTGTTGCTGAAATTGCTTAGGTCATGGCCAATTGCTATGATATTTCCTGTTATTGATATTGTAAGGATGATAGTTCTTCACCCAGATGGGGCTATTCTACTTCTCAAGCATTTTGAAGCTGAAAACGATATACTAACGGAATTGATTAAGAAAGTCACAATAAATCCAACAATCCCTGCAAATCTGTTGACCAGCATCCGAACTGTAACTAATCTCTTTAAGAATTCATGCTACTACAGTTGGTTGCAGAAACATCGTAGTAAGATTCTTGATGCTTTCTCAAGTTGTAGTTCATCTACAAATAAAAATTTGCAGTTGTCATACTCTACCTTGTTACTCAATTATGCTGTGCTTTTGATTCAAATGAAGGATCTCGAAGGCCAATCTCAAGTACTATCAGCAGCACTTGAGATTGTAGAAGATGAAAACGTGGAAGTTGATTCCAAATTCCGTGCTTTTGTTGCAGTTGGATCACTGATGCTCGAGGGTCTTGTGAAGAAAATAGCAGTGGACTTTGATGTTTTGAACATTGCAAAGGCAGCCAAGAATTCTAAGGATGCCAAAATTTCTGAAGTGGGGGCTGACATTGAATTGTTAACAAAGAATTGCTGA 2208 0.4149 MDIDFKDFQLRCELPGHEDDVRGICVCGNEGIATSSRDRTVRFWSLDPSDKRKFMSSKILLGHTSFVGPLAWISPNENFPEGGIVSGGMDTLVLVWDLKTGEKVQTLRGHQLQVTGIALDDGDIVSCSVDCNLKRWRNGQPVENWEAHKAAIQAVIKLPSGELVTDTVRGLALMSDLGILSASHDGSLRLWAVSGEVLMEMVGHTAIVYSVDSHASGLIVSGSEDRYAKIWKDGVCVQSIEHPGCVWDAKFLENGDIVTACSDGVVRIWTAHQDYVADPLELDLYTSELSQYKSSRKRVGGLKLEELPGLEALKIPGTSDGQTKVVREGDNGVAYAWNMGEQKWDKVFPLLLMLRNDTNRPILDGTQYDYVFDVDIGDGLPIRKLPYNRSDNPYDTADKWLLKENLPLSFREQIVQFILQNTGQKDITFDAAFRDPYTGSSAYVPGQPSNSVVSAKPTFKHIPKKGMLVFDAAQFDGILKKITEFNNALLSDQEKQNLALTELDVSRLGAIVKILKDTSHYHSSKFADADIALLLKLLRSWPIAMIFPVIDIVRMIVLHPDGAILLLKHFEAENDILTELIKKVTINPTIPANLLTSIRTVTNLFKNSCYYSWLQKHRSKILDAFSSCSSSTNKNLQLSYSTLLLNYAVLLIQMKDLEGQSQVLSAALEIVEDENVEVDSKFRAFVAVGSLMLEGLVKKIAVDFDVLNIAKAAKNSKDAKISEVGADIELLTKNC 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0676 735 Pfam PUL domain 462 727 IPR013535 -
Sto2g0676 735 PANTHER PHOSPHOLIPASE A2-ACTIVATING PROTEIN 4 732 - -
Sto2g0676 735 Gene3D - 3 163 IPR015943 GO:0005515
Sto2g0676 735 Gene3D - 164 284 IPR015943 GO:0005515
Sto2g0676 735 ProSiteProfiles PFU domain profile. 336 432 IPR015155 -
Sto2g0676 735 SUPERFAMILY WD40 repeat-like 4 281 IPR036322 GO:0005515
Sto2g0676 735 Gene3D - 460 731 IPR011989 -
Sto2g0676 735 Pfam PFU (PLAA family ubiquitin binding) 316 425 IPR015155 -
Sto2g0676 735 Pfam WD domain, G-beta repeat 197 232 IPR001680 GO:0005515
Sto2g0676 735 Pfam WD domain, G-beta repeat 12 45 IPR001680 GO:0005515
Sto2g0676 735 Pfam WD domain, G-beta repeat 235 269 IPR001680 GO:0005515
Sto2g0676 735 Pfam WD domain, G-beta repeat 101 136 IPR001680 GO:0005515
Sto2g0676 735 ProSiteProfiles PUL domain profile. 460 731 IPR013535 -
Sto2g0676 735 CDD WD40 10 269 - -
Sto2g0676 735 Gene3D - 355 430 IPR038122 -
Sto2g0676 735 ProSiteProfiles Trp-Asp (WD) repeats profile. 84 106 IPR001680 GO:0005515
Sto2g0676 735 ProSiteProfiles Trp-Asp (WD) repeats profile. 14 54 IPR001680 GO:0005515
Sto2g0676 735 PANTHER PHOSPHOLIPASE A-2-ACTIVATING PROTEIN 4 732 - -
Sto2g0676 735 SMART WD40_4 100 137 IPR001680 GO:0005515
Sto2g0676 735 SMART WD40_4 7 45 IPR001680 GO:0005515
Sto2g0676 735 SMART WD40_4 194 232 IPR001680 GO:0005515
Sto2g0676 735 SMART WD40_4 233 270 IPR001680 GO:0005515
Sto2g0676 735 SMART WD40_4 53 97 IPR001680 GO:0005515
Sto2g0676 735 SMART WD40_4 138 192 IPR001680 GO:0005515
Sto2g0676 735 ProSitePatterns Trp-Asp (WD) repeats signature. 84 98 IPR019775 -
Sto2g0676 735 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Sto2g0676 735 PRINTS G protein beta WD-40 repeat signature 84 98 IPR020472 -
Sto2g0676 735 PRINTS G protein beta WD-40 repeat signature 179 193 IPR020472 -
Sto2g0676 735 Coils Coil 654 674 - -
Sto2g0676 735 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 232 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0676 1 733 Acyl Lipid Metabolism Gene Families AT3G18860 69.485 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0676 K14018 - gmx:100816481 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0676 2 5730284 5743541 Sto2g0676 2 5730284 5743541 ECH