Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0673 ATGGCCATCTCTCCCCACCACCTCTGCTTCCGTCTCCCTCCTTCTTATTCTACTCGATCAACGGACCACCTCGCTAAGATCGGAACTCTCCGATGCCGGAAGCCTCTCTCCGTCCGGTGCTCCATCGATCCTTCCTCGTCTTCCGTCGCCGGAGACTCGGATTTCGATGCCAAGGTTTTCCGGAAGAATCTGACCAGGAGTAAGAATTATAACCGCAAAGGTTTCGGTCACAAGGAAGAGACCCTCGAGGCCATGAATCGCGAGTATAGTAcaaGTGAAATCATTGAGACTTTGAAGGAGAATAAATATGAGTATAGATGGGGTGATGTTACAGTGAGGATGGCTGAAGCATATGGCTTCTGCTGGGGAGTGGAGAGAGCTGTTCAAATTGCTTACGAGGCCAGAAAACAGTTTCCTACCGAGAAAATGTGGATTACCAATGAAATCATTCACAATCCTACTGTTAATAAGCGGCTAGAGGAGATGAAAGTACAGAACATTCCTCTGGAGGAAGGAGTTAAACAATTTGATGTTGTCGACAAGGGCGATGTTGTGATTTTGCCTGCTTTTGGAGCAGCGGTGGATGAAATGTTGACTTTGAGTGAAAAAGATGTACAGATTGTCGATACAACTTGTCCATGGGTTTCGAAGGTGTGGAATGTCGTTGAGAAGCACAAGAAAGGAGATTATACCTCTATCATACACGGTAAGTATGCCCACGAGGAAACTGTAGCAACTGCATCTTTTGCTGCCAAGTATATCATTGTGAAGAATATGGCCCAGGCAGAATATGTTTGTGACTATATTCTTGGTGGTGGACTTAATGGATCCAGCACAACAAAGGATGCGTTTCTAGAGAAATTTAAATTTGCAATTTCTGAGGGTTTCGATCCAGACAGTGACCTGATAAAAGTAGGCATTGCAAATCAGACAACAATGCTTAAGGGAGAGACTCAAGATATTGGGAAACTAGTGGAGAGGACAATGATGCGCAGATTTGGTGTGGAAAACATCAATGAACACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGGCAAGATGCTATGTATAAGCTAGTGGAGAAAGATCTGGATCTTATGTTAGTAATTGGAGGATGGAACTCCAGCAATACATCTCACCTGCAAGAGATAGCTGAGGTTCGTGGAATTCCTTCTTACTGGATTGACAGTGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTAAATCATGGCGAACTGGTGGAGAAAGAAAACTGGCTGCCCAAGGGTCCAATAACCATTGGTGTAACATCTGGTGCATCCACACCAGACAAGGTTGTTGAAGATGTTCTTATGAAGGTGTTTGATTTGAAACGAGAAGAAGCATTGCAATTCGCATAA 1398 0.4392 MAISPHHLCFRLPPSYSTRSTDHLAKIGTLRCRKPLSVRCSIDPSSSSVAGDSDFDAKVFRKNLTRSKNYNRKGFGHKEETLEAMNREYSTSEIIETLKENKYEYRWGDVTVRMAEAYGFCWGVERAVQIAYEARKQFPTEKMWITNEIIHNPTVNKRLEEMKVQNIPLEEGVKQFDVVDKGDVVILPAFGAAVDEMLTLSEKDVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAAKYIIVKNMAQAEYVCDYILGGGLNGSSTTKDAFLEKFKFAISEGFDPDSDLIKVGIANQTTMLKGETQDIGKLVERTMMRRFGVENINEHFISFNTICDATQERQDAMYKLVEKDLDLMLVIGGWNSSNTSHLQEIAEVRGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENWLPKGPITIGVTSGASTPDKVVEDVLMKVFDLKREEALQFA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0673 465 CDD lytB_ispH 112 453 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Sto2g0673 465 TIGRFAM ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 112 453 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Sto2g0673 465 Gene3D - 346 464 - -
Sto2g0673 465 Gene3D - 212 345 - -
Sto2g0673 465 Gene3D - 121 211 - -
Sto2g0673 465 Pfam LytB protein 112 452 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Sto2g0673 465 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 9 463 - -
Sto2g0673 465 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 110 457 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0673 Sto-Chr2 5711379 5716007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0673 K03527 - qsu:112040117 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0673 2 5711379 5716007 Sto2g0673 2 5711379 5716007 ECH