Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0664 ATGGCGACGGAGTATCAAGAAGATGCAGTGAAATTGATGAGCTCCGATCTGAGGGATCTCCGTCACGCCGCTAACAATCTTGCCAAACACGCCATTAAGCTCGGCGGATTAGGGTTTGGTACTTCCTTCCTCCAATGGCTCGCTTCCATCGCCGCCATTTACTTGTTGGTTTTGGATCGTACGAACTGGAAGACAAACATTCTTACATCACTACTGATTCCATACATTTACTTGAGCCTTCCTTCTATACTTTTCAGCATCTTCAGCATATTACAGTATCAAATTTCCTTTATCTTATTCTGCTTCTTTTGGTTTATTCAAAGCGGAGAGATTGGGAAATGGATAGCCTTCATTGCTGTTGTACTACGGCTTTTCTTTCCAAGGCGCTTCCCTGATTGGCTGGAATTGCCAGGTGCATTGATTCTTCTAATAGTAGTGGCTCCAAGTCTATTCTCAAGCACCCTGAGACACAGTGTGGTTGGGGTAGCAATATGCCTTGGGATTGCATGCTATTTGCTGCAAGAACACATAAGAGCATCTGGTGGTTTCAGAAATTCCTTCACTAAAGCCCATGGCATCTCCAACTCCATTGGCATCATCCTCCTCCTAGTCTATCCTGTCTGGGCTATCGTACTCTACATTCTCTAA 648 0.446 MATEYQEDAVKLMSSDLRDLRHAANNLAKHAIKLGGLGFGTSFLQWLASIAAIYLLVLDRTNWKTNILTSLLIPYIYLSLPSILFSIFSILQYQISFILFCFFWFIQSGEIGKWIAFIAVVLRLFFPRRFPDWLELPGALILLIVVAPSLFSSTLRHSVVGVAICLGIACYLLQEHIRASGGFRNSFTKAHGISNSIGIILLLVYPVWAIVLYIL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0664 215 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 95 214 IPR008892 GO:0016021
Sto2g0664 215 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 4 88 IPR008892 GO:0016021
Sto2g0664 215 Pfam Cold acclimation protein WCOR413 105 202 IPR008892 GO:0016021
Sto2g0664 215 Pfam Cold acclimation protein WCOR413 6 88 IPR008892 GO:0016021
Sto2g0664 215 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 95 214 - -
Sto2g0664 215 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 4 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0664 Sto-Chr2 5627635 5629738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0664 - - vvi:100248690 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0664 2 5627635 5629738 Sto2g0664 2 5627635 5629738 ECH