Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0659 ATGAAAAATCACACGGGTGGTTCTACTACCACCATGACAATGCACGACCCACCCACTAATACGACCCTACGCCGTCCCAAATTCGGATCCTTCCTGCATTCCGACCCGACCTCGCTCTACTCCCCCGCCGCCGACGACTTCTCCGACCTCCACCACCAGCGTCACAGCAACGTCGACGCCTCCACCATCTCCGACAGCGCCCTCTCCACCCACAACACATCTCCGCCCGACGCCTCGCCTTTCTCTAAATCTCCATGGCTCCAGACCTTGCCCTTCAACTCTCCCGCCAatttccaccaccaccacgacgGCGACGACGGAGAGAGTTTCCCTCCCAACGGCCTCATCGGCTCGCTCGTTCGCGAGGAGGGCCACATATACTCGTTGGCGGTTTCGGGAGAGTTGTTGTACACCGGATCTGATAGCAAGAACATCAGAGTCTGGAAGAATCTGAAGGATTTCACGGGTTTTAAATCGAGCAGTGGATTGGTGAAATCGATCGTGATTTCCGGGGAGAGGATCTTCACGGGCCACCAGGATGGGAAGATCCGCGTGTGGAAATTCTCGCACAAGAATCCTATCTCTTACAAGCGCGTGGGAAGCTTGCCTACTTTCAAAGACTACGTGAAGAGCTCGATGAATCCGAAGAACTACGTGGAAGTCCGGCGGCGCAAGAACGCCGTGAAGATCAAGCATTACGACGCCGTCTCGAGCCTCGCACTCGCGGAGGAGCACGGCTTGTTGTACTCCGGCTCGTGGGACAAGACGCTCAAGGTGTGGCGCTTGACGGACTCCAAGTGCCTGGAGTCGATCCACGCGCACGAGGACGCCGTGAACTCGGTCGTCGCCGGGTTCGTGTGCTTCGTCTTCACCGGCTCGGCGGACGGGACGGTGAAGATGTGGAAGAGGGAGATAGTGGGGAAGGGGAGTACAAGCCACGCGCTGGATCGCGTGTTGCTGAAGCAGGAGAACGCCGTAACGGCCTTGGCGGTTAATCACGCGGCCAGCGTGGTGTACTGCGGGTCGTCCGACGGGCTGTTGAACTTCTGGGAGAGAGACGCGAAGGGGAATCTCTGCCACGGCGGAGTCCTCAAGGGACACAAGCTCGCCGTCCTCTGCCTCACCTCCGCCGGGAACCTCGTCTTCAGCGGCTCCGCTGATAAGAACATATGCGTGTGGAAGCGGGAGGAGAGCGGGATCCACGTGTGCCTCTCGGTGCTCACGGGCCACACCGGGCCCGTGAAATGCATCGCGGTGACGTCCGAAGAAGATCACGAAGACGGAAACAATAAGCAACAGAAcgagagaggaggaagaagatggcTAGTGTACACAGGGAGCTTGGACAACTCGGTGAAGGTGTGGCGCGTGTCGGAACACGCGCCGGAGCTGAGGATGTTGCAAGGGCTAGATTGGGTTCCCCCAAAGAGGGAGCACTTGAAATTTTGTAAGGTTGTGTGTGTGATGATGGAAGGAGACGTAGCGAAGGAATGCCCTGAAAGGGAGGGACTAATAGTGGCCTGA 1524 0.5636 MKNHTGGSTTTMTMHDPPTNTTLRRPKFGSFLHSDPTSLYSPAADDFSDLHHQRHSNVDASTISDSALSTHNTSPPDASPFSKSPWLQTLPFNSPANFHHHHDGDDGESFPPNGLIGSLVREEGHIYSLAVSGELLYTGSDSKNIRVWKNLKDFTGFKSSSGLVKSIVISGERIFTGHQDGKIRVWKFSHKNPISYKRVGSLPTFKDYVKSSMNPKNYVEVRRRKNAVKIKHYDAVSSLALAEEHGLLYSGSWDKTLKVWRLTDSKCLESIHAHEDAVNSVVAGFVCFVFTGSADGTVKMWKREIVGKGSTSHALDRVLLKQENAVTALAVNHAASVVYCGSSDGLLNFWERDAKGNLCHGGVLKGHKLAVLCLTSAGNLVFSGSADKNICVWKREESGIHVCLSVLTGHTGPVKCIAVTSEEDHEDGNNKQQNERGGRRWLVYTGSLDNSVKVWRVSEHAPELRMLQGLDWVPPKREHLKFCKVVCVMMEGDVAKECPEREGLIVA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0659 507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 266 - -
Sto2g0659 507 PANTHER EN/SPM-LIKE TRANSPOSON PROTEIN-LIKE 19 468 - -
Sto2g0659 507 Gene3D - 311 482 IPR015943 GO:0005515
Sto2g0659 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 394 IPR001680 GO:0005515
Sto2g0659 507 MobiDBLite consensus disorder prediction 1 28 - -
Sto2g0659 507 PRINTS G protein beta WD-40 repeat signature 248 262 IPR020472 -
Sto2g0659 507 PRINTS G protein beta WD-40 repeat signature 289 303 IPR020472 -
Sto2g0659 507 PRINTS G protein beta WD-40 repeat signature 443 457 IPR020472 -
Sto2g0659 507 Pfam WD domain, G-beta repeat 362 394 IPR001680 GO:0005515
Sto2g0659 507 Pfam WD domain, G-beta repeat 403 455 IPR001680 GO:0005515
Sto2g0659 507 Pfam WD domain, G-beta repeat 266 302 IPR001680 GO:0005515
Sto2g0659 507 Pfam WD domain, G-beta repeat 123 149 IPR001680 GO:0005515
Sto2g0659 507 Pfam WD domain, G-beta repeat 232 260 IPR001680 GO:0005515
Sto2g0659 507 Pfam WD domain, G-beta repeat 150 187 IPR001680 GO:0005515
Sto2g0659 507 Gene3D - 216 310 IPR015943 GO:0005515
Sto2g0659 507 MobiDBLite consensus disorder prediction 66 114 - -
Sto2g0659 507 CDD WD40 123 456 - -
Sto2g0659 507 SUPERFAMILY WD40 repeat-like 112 462 IPR036322 GO:0005515
Sto2g0659 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 302 IPR001680 GO:0005515
Sto2g0659 507 Gene3D - 102 200 IPR015943 GO:0005515
Sto2g0659 507 SMART WD40_4 112 149 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 150 187 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 357 394 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 400 456 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 312 351 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 264 302 IPR001680 GO:0005515
Sto2g0659 507 SMART WD40_4 223 261 IPR001680 GO:0005515
Sto2g0659 507 MobiDBLite consensus disorder prediction 66 95 - -
Sto2g0659 507 MobiDBLite consensus disorder prediction 1 27 - -
Sto2g0659 507 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 19 468 IPR045182 -
Sto2g0659 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0659 Sto-Chr2 5580906 5582721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0659 230 455 Miscellaneous Gene Families AT5G08390 23.043 1.17e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0659 - - gsj:114379287 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0659 2 5580906 5582721 Sto2g0659 2 5580906 5582721 ECH