LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g0652	ATGTTGATGAATATACCAATGTCAATTCTAGTATTTTCTTCATTGTACATCCTTTTCGACAAGGTGGAATTCCAATGGAAGGTTCAAGCTAGACCAAAgacatttttatcatattttgagAAGAGACAGTTATCTTTGAATGATTCACGGCTCTCTACTAAACCTCCCCCTGCAAAATGGAAGAGCAAAATTGGTTCTCCTGTTGTTGAGGCTGCACTGAATGATTTTGTCGATAAGATGTTGAAGGATTTCGTCATAGATTTGGCATACTCAGGTATTTCTTCAGATAAGGAGTTTCCTGATCAATTATATGCATTAATCATGGATGCTCTTGGTGAAATATCAGCAAGGGCCAAAGAGATAAACCTGGTTGACCTTCTAACAAGGTgtttggttggagtggtaggtacttcattccccttaagcaaggtctcaaCTTCGAGTCTTGCGGACATAGTTGATTTAATAGGTGATCACTTAGGTCTCTTCAGAAAAAATCAAGCTGCCATAGGTGTCGATGTTATGTTAACCTTATCTTCTGAAGAAAGGGATGAAAGGTTGAAATACCACATGCTAAATTCTAAGGAGCTTCATCCTGCACTAATATCTCCTGGGAGTGAGTACAAGGTTCTTCAGCGACTAATGAGAGGTGTATTAGCTTTAGTACTAAGACATCAAGAAGTTCATTGTCCTGTAATACGATCTATAGCTCAGGAAATTTTAACTTGCTTGGTAATGCAACCTGTATTAAAGTTGGCAAGTCCTGGGTTTATCAATGAGCTGATTGAAGACCTTCTGCTTGTCGTTAAAGATATGAATATAACAGGGTCAAAGGTTGATCAATCCGTTAGTGCAGCAAGTCATTGCAGTCATTCTGTTGCTGATGGGGCTGCAGAAGATAATCACACATCATCCTCAAACAAGAATCCATCTGCAAATCAAGGGACAGATGAGACACAGGCTAAAATGCACCATCAAGTAGAGACATTATTGCAAAGCAACACTCTCCAGCATGAGCATTTGCAAGGCAAGCCAGCCGATTGGGCACGAGTGTTGGAGGCTGCAACCCAAAGAAGAACTGAAGTTCTTACGCCTGAGAATCTTGAGAACATGTGGACCAAAGGGACGGATTATAAGAAGAGAGAGAACAAAAATATCAAAGTGGAGCATGGAGAGCATGCATTTCTAGAAGGGAAATATTCCCTGCATCCTGTTCAGAGCTTGGGTTTAGATCCCTTGTTGAACGTTGGGAATAGAAATGGGCTTGAGTCCTCTCATGATCCTGAAAAGGAGCCATCTTTAGAAGAAGAGCATAGAGTTGATGAAGTGAGGGTTTGTAAGAGTCCACTCAAGAGACCTGACAGTGCTTTTCACATGGGAAACCAGTTTTTTAAAGAAGGAGGATCTAATATCGCCGAGCTCCAAAGCCATGGTTTTGAGAGAGACAGTGAAGGGTTGAGGATGAAGAATGCTCCTGACATGGTTACTAAGAGAGAGCAGGGTCAACTAGTTCCCAAGCTTCGTTGCCGGGTTATGGGAGCTTATTTTGAGAAGCTCGAGTCTAAATCTTTTGCTGTCTATTCGATAGCAGTGACAGATGCGCAAAATAAAACTTGGAACTTTGATACATTGCATAGGAATCTTAAAGATAATCCAAATTACACATTAAATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATTCTTTTGTCCTTAAGCGTTGCATTCTGCTTGATAAATATCTTCAGGACCTCCTCTCAATAGCTAATGTTATTGACCAACATGAAATTTGGGACTTTTTAAGTATTTCCTCAAAGAATTACTCTTTTGGGAGATCAACTTCAATGATGAGGACCCTTGCAGTTAGTGTGGATGATGCTGTGGATGATATTATGCGCCAGTTTAAAGGCGTTTCAGATGGATTAATGCGAAAAGTTGCCGGTCCATCGCCCGCTAGTGAAGGTTCTTCTACATCTTCACAGAATAGTTTTTGGAATGGTGATGAAATAGATAAGATTGTCTCAAGGCAGAATACTTCAGAAACTATGTCAAGCTCTGATCAGGAGGAAGCTGAAAACAAGGGAAGTTTTGTCCATGAGAATATTGATAGAGAAGAGGAGCAAGCTACAAGATCGAATTCTGACAGTGAATTGAACTCTAAGGGTTCCCCACCATATAATACTGATGAGCCTGGTAATCTGGATCTAGATAGAAAACATGATCTGGTGTTGGATGCTAGAGTTGGCAAGGAAGGTCCAGCCACAAATCTTACTCTCATTCCTGATAATTTGGGGGAAGTGCCACCTGAGTGGACCCCGCCTAATGTGAGTGTCCCTATCTTGAATTTGGTTGACAAGATTTTACAGTTAGCAATGGAAGATGCTATTGATGATTTTCTCTTGAGGCAAATACATTGGCTCCGGAGGGAGGATACTATTGCCCTAGGAATTCGATGGATTCAAGATATCTTGTGGCCTGGTGGTACATTTTTCTCAAAAGTAAAGGCTTCTCAGATGGAATCTAGTGACAATGGAGTTTCTCAAAAGTCATCTCCAACAATAGAAGACTCTAATGAAAGCAATAGCTGTAAATCAGGGACAGGGTGTTTTGAACAACAACTTGAGGCTGTTCGTAGAGCAAGTGATATCAAGAAAATGCTCATCGATGGAGCTCCAACAGCCTTAGTCAGCTTAATTGGACAAAAACAGTACAGGCGTTGTGCTCAAGACATATACAACTTTAGTCAGTCTACTATATGTGTGAAGCAACTTTCTTTTGCAATCCTGGAACTTGTACTTATATCCATCTTCCCTGAGATGAGGAATCTAGTCTTGAAACTTCATGAGCACATGCATGTTCACCAGCCTGTATAA	2880	0.3983	MLMNIPMSILVFSSLYILFDKVEFQWKVQARPKTFLSYFEKRQLSLNDSRLSTKPPPAKWKSKIGSPVVEAALNDFVDKMLKDFVIDLAYSGISSDKEFPDQLYALIMDALGEISARAKEINLVDLLTRCLVGVVGTSFPLSKVSTSSLADIVDLIGDHLGLFRKNQAAIGVDVMLTLSSEERDERLKYHMLNSKELHPALISPGSEYKVLQRLMRGVLALVLRHQEVHCPVIRSIAQEILTCLVMQPVLKLASPGFINELIEDLLLVVKDMNITGSKVDQSVSAASHCSHSVADGAAEDNHTSSSNKNPSANQGTDETQAKMHHQVETLLQSNTLQHEHLQGKPADWARVLEAATQRRTEVLTPENLENMWTKGTDYKKRENKNIKVEHGEHAFLEGKYSLHPVQSLGLDPLLNVGNRNGLESSHDPEKEPSLEEEHRVDEVRVCKSPLKRPDSAFHMGNQFFKEGGSNIAELQSHGFERDSEGLRMKNAPDMVTKREQGQLVPKLRCRVMGAYFEKLESKSFAVYSIAVTDAQNKTWNFDTLHRNLKDNPNYTLNLPPKRIFSSSTEDSFVLKRCILLDKYLQDLLSIANVIDQHEIWDFLSISSKNYSFGRSTSMMRTLAVSVDDAVDDIMRQFKGVSDGLMRKVAGPSPASEGSSTSSQNSFWNGDEIDKIVSRQNTSETMSSSDQEEAENKGSFVHENIDREEEQATRSNSDSELNSKGSPPYNTDEPGNLDLDRKHDLVLDARVGKEGPATNLTLIPDNLGEVPPEWTPPNVSVPILNLVDKILQLAMEDAIDDFLLRQIHWLRREDTIALGIRWIQDILWPGGTFFSKVKASQMESSDNGVSQKSSPTIEDSNESNSCKSGTGCFEQQLEAVRRASDIKKMLIDGAPTALVSLIGQKQYRRCAQDIYNFSQSTICVKQLSFAILELVLISIFPEMRNLVLKLHEHMHVHQPV	959

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g0652	959	Pfam	Sorting nexin C terminal	783	920	IPR013937	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	694	714	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	843	868	-	-
	Sto2g0652	959	ProSiteProfiles	PXA domain profile.	66	270	IPR003114	-
	Sto2g0652	959	PANTHER	PX SERINE/THREONINE KINASE PXK	337	958	-	-
	Sto2g0652	959	PANTHER	PX SERINE/THREONINE KINASE PXK	1	314	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	423	440	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	297	320	-	-
	Sto2g0652	959	Gene3D	-	508	614	IPR036871	GO:0035091
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	648	737	-	-
	Sto2g0652	959	PANTHER	SORTING NEXIN CARBOXY-TERMINAL PROTEIN	1	314	-	-
	Sto2g0652	959	PANTHER	SORTING NEXIN CARBOXY-TERMINAL PROTEIN	337	958	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	419	440	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	295	320	-	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	715	729	-	-
	Sto2g0652	959	ProSiteProfiles	PX domain profile.	505	610	IPR001683	GO:0035091
	Sto2g0652	959	SUPERFAMILY	PX domain	508	607	IPR036871	GO:0035091
	Sto2g0652	959	Pfam	PXA domain	66	264	IPR003114	-
	Sto2g0652	959	MobiDBLite	consensus disorder prediction	653	693	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g0652	Sto-Chr2	5529358	5538110	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g0652	K17925		-	gmx:100811262	1058.9

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g0652	2	5529358	5538110	Sto2g0652	2	5529358	5538110	ECH