Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0548 ATGGGTAAGATCATGTCCAGATTGGGAAAGAGGTTCTTCTTCTTACAGAAGAGAGAATTGAGGATTGTTATGGTGGGTCTTGATTCTTCAGGGAAAACCACCATTCTTTACAAGCTCAAATTGgggcaaaatgtccaaaccgtACCAACTATAGGTTTTAATGTAGAGAGGGTAGAATACAAAAATGTTAACTTTACCGTCTGGGATGTAGGAGGACAAAGCCAGATTCGGGCATTGTGGAAACATTACTTTCACAATACACATGGAGTTGTTTTTGTGGTGGACAGCAATGACAGACAAAGAATCTCAGAAGCTAGGAGTGAATTGCATAATATTCTAAGTTATTGTGAAGTAGTAGGGAATTGTGTACTTCTTGTGATAGCCAATAAGCAAGACGTTGATGGCGCCATGAGTATTGACGAGATTGCTCATAAACTTGCCCTTCATTCACTTCCTCATCGTCGATGGTACATTCAGAGTGCTTCTGCCATATCTGGCCAGGGCCTCTATCAAGGTCTTGATTGGCTCTTGACTCTCAAATCCTTCAAATCCTCCATTAAACCCTCCTCCATCCCTCCTTGGTCTTGCTTAGCTTCCTGGAATTTCTCCGCCGACCCCTGCTCCCTCCCTCGCCGGACCGCCTTCATCTGCGGCGTCGCCTGCTCCGGCGACTCAACCCGGGTCACCCAAATCACACTCGACCCGGCCGGCTACTCCGGTTCACTCACCCCTCTCATTTCCCACCTCACCCTCCTCACCACCCTCGACGTCGCCGACAACTCCTTCTCCGGCCAAATCCCACCTTCTCTCTCCTCCCTCCCCCACCTCCAATCCCTCACTCTCCGATCAAATTCCTTCTCCGGTCCCATCCCTCCCTCCATCATCAACCTCAAATCGCTCCAAAGTTTGGATCTTTCCCACAATTCACTATCTGGGTCGCTCCCGAATTCCATGGACTCCCTCTCGAGCTTGACCCGAATCGATCTCAGTTTCAATAGGCTCACCGGGTCGCTCCCGAAGCTGCTTCCTCCGAACTTGATCGAGCTCGCGATGAAGGGGAATTCGCTATCTGGGTTCCTCTATAGGTCCACCTTCGAGAAGATGAAGCAATTGGAAGTGGTGGAGCTCAGCGAGAACGCACTCGCCGGAAAAATCGAAGCTTGGTTCTTTTCTATGCCGGCGCTGCAGCAAGTTGATTTGGCGAATAACAGCTTCGCCGGCGTGGAGATCGGGAAACCCGTCGGAGGGGAGAGCAACCTCGTGGCGGTGAACTTGGGGTTTAACAAGATCCGAGGTTTGGCGCCCGCGAATTTCGGGGCGTACCCTGTTTTGTCGTTCCTGTCGCTCCGGTACAACCAGCTACGTGGCGCGATCCCATTGGACTATGGACAGAGCAAGTCGATGAAGCGGCTGTTTCTGGACGGGAATTTCCTGGTGGGGAAGCCGCCGGCGGGATTCTTCGGCGGCGCGTCGGTGTCCGGCAGCTTGGGAGATAATTGTCTGCAGAGCTGTCCACGGAGTTCGGAGCTATGCGCGACTGCACAGAAACCGAGCTCTGTTTGCAAGCAAGCTTACCGTGGAAAACCAAGATCGTAG 1596 0.5125 MGKIMSRLGKRFFFLQKRELRIVMVGLDSSGKTTILYKLKLGQNVQTVPTIGFNVERVEYKNVNFTVWDVGGQSQIRALWKHYFHNTHGVVFVVDSNDRQRISEARSELHNILSYCEVVGNCVLLVIANKQDVDGAMSIDEIAHKLALHSLPHRRWYIQSASAISGQGLYQGLDWLLTLKSFKSSIKPSSIPPWSCLASWNFSADPCSLPRRTAFICGVACSGDSTRVTQITLDPAGYSGSLTPLISHLTLLTTLDVADNSFSGQIPPSLSSLPHLQSLTLRSNSFSGPIPPSIINLKSLQSLDLSHNSLSGSLPNSMDSLSSLTRIDLSFNRLTGSLPKLLPPNLIELAMKGNSLSGFLYRSTFEKMKQLEVVELSENALAGKIEAWFFSMPALQQVDLANNSFAGVEIGKPVGGESNLVAVNLGFNKIRGLAPANFGAYPVLSFLSLRYNQLRGAIPLDYGQSKSMKRLFLDGNFLVGKPPAGFFGGASVSGSLGDNCLQSCPRSSELCATAQKPSSVCKQAYRGKPRS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0548 531 ProSiteProfiles Leucine-rich repeat profile. 299 321 IPR001611 GO:0005515
Sto2g0548 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 178 IPR027417 -
Sto2g0548 531 SMART arf_sub_2 1 183 - -
Sto2g0548 531 Pfam Leucine rich repeat 296 334 IPR001611 GO:0005515
Sto2g0548 531 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 177 531 - -
Sto2g0548 531 PRINTS GTP-binding SAR1 protein signature 21 44 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 PRINTS GTP-binding SAR1 protein signature 49 73 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 PRINTS GTP-binding SAR1 protein signature 76 101 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 PRINTS GTP-binding SAR1 protein signature 122 143 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 Gene3D Ribonuclease Inhibitor 342 508 IPR032675 -
Sto2g0548 531 SMART rab_sub_5 20 172 - -
Sto2g0548 531 PRINTS Leucine-rich repeat signature 300 313 - -
Sto2g0548 531 PRINTS Leucine-rich repeat signature 321 334 - -
Sto2g0548 531 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 177 531 - -
Sto2g0548 531 ProSiteProfiles small GTPase Arf family profile. 13 182 - -
Sto2g0548 531 SMART sar_sub_1 1 180 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 ProSiteProfiles small GTPase SAR1 family profile. 13 250 - -
Sto2g0548 531 Pfam ADP-ribosylation factor family 13 177 IPR006689 GO:0003924|GO:0005525
Sto2g0548 531 Gene3D Ribonuclease Inhibitor 179 341 IPR032675 -
Sto2g0548 531 SUPERFAMILY L domain-like 199 484 - -
Sto2g0548 531 TIGRFAM small_GTP: small GTP-binding protein domain 19 139 IPR005225 GO:0005525
Sto2g0548 531 Gene3D - 3 178 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0548 Sto-Chr2 4681222 4688159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0548 223 524 Receptor kinase-like Gene Family AT5G46330 29.967 6.15e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0548 - - gmx:100801713 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0548 2 4681222 4688159 Sto2g0548 2 4681222 4688159 ECH