Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0545 ATGGCGACTTCTGCTTCCCAAACCCTTCGAACCCCCTCGCTCGGGAGAAACCCAtcgctttctctctcttccaagCTCTCGCTGTCCTCGCCCTTCTCAGTCTCTCTCCGGAGCCGCCGCTGTAGCCGGACCGCGCGGCCGCTTGTGGTGGTGGTCTCGGCGGGTCTGGATGCCAAGCCTACCATCCTCGTGTCTGAGAAGCTTGGTGAAGCTGGGTTGAATCTGTTGAAGGACTTCGCTAATGTTGATTGCTCTTACAATCTGACCCCTGAGGAGCTCTGCACCAAGATCTCGCTCTGCGATGCGTTGATTGTGCGTAGCGGAACCAAGGTCAGTCGCGAGGTGTTCGAGTCGTCCGGTGGAAGGCTCAAGGTGGTTGGAAGAGCCGGCGTTGGAATTGACAATGTGGATCTGGCGGCGGCTACCGAGCATGGATGCTTGGTGGTGAACGCACCAACGGCTAACACGGTGGCCGCGGCGGAGCACGGGATTGCACTCTTGGCCGCCATGGCTAGGAACGTTGCTCAAGCCGATGCGTCCGTGAAAGCTGGGAAATGGCAACGAAATAAGTATGTAGGCGTGTCCCTAGTCGGGAAAACACTTGCTGTGATGGGATTTGGGAAGGTGGGTTCTGAAGTTGCTCGCCGTGCTAAGGGACTTGGTATGCATGTTATTGCCCATGACCCATATGCTCCAGCAGACCGTGCTCGGGCAATTGGTGTGGAGTTAGTGAGCTTCGATGAAGCCATTGGTACTGCAGATTTTATCTCTTTGCATATGCCTCTTACTCCTGCTACATCAAAGATTCTGAATGATGAGACTTTTGCTAAGATGAAAAAAGGAGTTCATATAGTCAATGTTGCTCGTGGAGGAGTCATTGATGAGGATGCTCTTGTTAGGGCACTAGATAGCGGCATTGTAGCTCAGGTTTTTGCTATCTCTTATTTGGAAGCATTAGCAGCGCATTGtaaaGCGGCACTTGATGTTTTCACAGAGGAGCCACCCCCAAAAGACAGCAAATTGATTCTGCATGAAAGAGTTACTGCAACACCTCATCTTGGTGCTAGTACTGTGGAAGCTCAGGAAGGTGTGGCTATTGAAATAGCAGAAGCTGTACTCGGGGCCTTGAAAGGGGAACTTGCTGCTACTGCTGTCAATGCACCAATGGTTCCCGCAGAGGTGATAACAGAGCTGAAACCATTTGTTGATCTAGCTGAGAAACTGGGCAGACTGGCTGTCCAGTTGGTAGCAGGAGGAAGTGGTGTAAAATCAGTGAAAGTGACTTATGCTTCTGCTAGAGCTCCCGATGATCTTGACACTCGTCTTCTCCGTGCCATGATAATCAAGGGTCTCATTGAGCCCATATCCagtgtgtttgtgaatttggTTAATGCTGATTTCACTGCCAAACAAAGAGGACTCAGGATAACTGAGGAGAGAATCCTTCTTGATGGCTCACCTGAGAGTCCACTTGAATTCATCCAGATCCAGATTGCTAATGTAGAATCTAGATTTGCTAGTGCCATATCAGAGTCCGGCGAGATTAAGCTCGAGGGTCGGGTGAAAGACGGAATCCCCCATCTGACAGAGGTTGGATCTTTTGATGTCGATGTGAGCTTGGAGGGGAGCATTATACTTTGCAGGCAGGTGGATCAACCTGGAATGATTGGGAAGGTTGGGAGTGTTTTGGGCGAGGAGAATGTGAATGTCAGCTTCATGAGTGTGGGAAGGATTGCTCCACGGAAGCAGGCTGTAATGGCAATTGGGGTGGATGACCAACCTAGCAAAGAAACATTGAAGAAGATTGGGGCAATTCCTGCGGTTGAGGAGTTCGTTTTCCTGAAGTTGTAA 1851 0.4954 MATSASQTLRTPSLGRNPSLSLSSKLSLSSPFSVSLRSRRCSRTARPLVVVVSAGLDAKPTILVSEKLGEAGLNLLKDFANVDCSYNLTPEELCTKISLCDALIVRSGTKVSREVFESSGGRLKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVELVSFDEAIGTADFISLHMPLTPATSKILNDETFAKMKKGVHIVNVARGGVIDEDALVRALDSGIVAQVFAISYLEALAAHCKAALDVFTEEPPPKDSKLILHERVTATPHLGASTVEAQEGVAIEIAEAVLGALKGELAATAVNAPMVPAEVITELKPFVDLAEKLGRLAVQLVAGGSGVKSVKVTYASARAPDDLDTRLLRAMIIKGLIEPISSVFVNLVNADFTAKQRGLRITEERILLDGSPESPLEFIQIQIANVESRFASAISESGEIKLEGRVKDGIPHLTEVGSFDVDVSLEGSIILCRQVDQPGMIGKVGSVLGEENVNVSFMSVGRIAPRKQAVMAIGVDDQPSKETLKKIGAIPAVEEFVFLKL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0545 616 CDD ACT_3PGDH-xct 545 616 - -
Sto2g0545 616 ProSiteProfiles ACT domain profile. 544 616 IPR002912 -
Sto2g0545 616 MobiDBLite consensus disorder prediction 1 25 - -
Sto2g0545 616 SMART AdoHcyase_NAD_2 189 358 IPR015878 -
Sto2g0545 616 Gene3D - 391 542 IPR029009 -
Sto2g0545 616 TIGRFAM PGDH: phosphoglycerate dehydrogenase 62 614 IPR006236 GO:0004617|GO:0006564
Sto2g0545 616 Pfam D-3-phosphoglycerate dehydrogenase intervening domain 397 490 IPR045626 -
Sto2g0545 616 Gene3D - 64 379 - -
Sto2g0545 616 PANTHER FORMATE DEHYDROGENASE 1 31 611 - -
Sto2g0545 616 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 59 192 - -
Sto2g0545 616 SUPERFAMILY ACT-like 534 613 IPR045865 -
Sto2g0545 616 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 164 354 IPR006140 GO:0051287
Sto2g0545 616 Gene3D - 543 616 - -
Sto2g0545 616 Gene3D - 155 352 - -
Sto2g0545 616 CDD PGDH_4 62 379 - -
Sto2g0545 616 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 201 228 IPR029752 -
Sto2g0545 616 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 355 IPR036291 -
Sto2g0545 616 PANTHER D-3-PHOSPHOGLYCERATE DEHYDROGENASE 31 611 - -
Sto2g0545 616 SUPERFAMILY Serine metabolism enzymes domain 392 538 IPR029009 -
Sto2g0545 616 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 386 IPR006139 GO:0016616|GO:0051287
Sto2g0545 616 Pfam ACT domain 544 606 IPR002912 -
Sto2g0545 616 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 249 271 IPR029753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0545 Sto-Chr2 4659454 4662356 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0545 K00058 - gmx:100808771 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0545 2 4659454 4662356 Sto2g0545 2 4659454 4662356 ECH