Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0532 ATGGCGGAGCTCATACTCCTCCGTCTCATCAAACTCCTATCGCCGCCATCTTCTCCGACAACCCATGTCGCTAGAAGACTCTGCTTCTCTAGCTTCGGATCATGCCCAAATCGTTGTTACTCCAATGCTGCCGATGATACCTTAAACGAAGCCAAGAGGCCAAGGAAGCACGCCAAATGGCTTACTCTTCCCCCGTTCACCGCCACCGTCAACGGCTCCGATCTCGGAAAGGAGCTTTCCGGCCGGCGTTCCGAAGTGAAACGCAGCGTTTCGGCTACCTCCACGATAACTGCGCTCAAATGGGTTCTTCGGTGCTGCCCGGAGCTACCCAGAAGCCTTGTACAGAAGCTATTTCGTCTTAGACAGGTTCGAAGAGAATCTGCTGCTGTAGAGAATAAAACTGAAGAAACTCAAGCGCCTGAACATAGACTAAAAAGGGTGGCAGCTAAGGATACCTTGAATTTAGGAGACCGGATCTTTCTTCCTGTTACTGTTAAAGAGACGCCTGCAGAGAAACTTGAGTCTGATATCACTGCCGAAGAAACGAAATTTATCCACAGCCTTGTGTTGTATAAGGATCCTGCAATTCTTGTTCTGAACAAGCCTCCAGGGATGTCTGTGCAGGGTGGCATTAATGTCAGCCGGAGTTTAGATGAAGTAGCTGCAGCATGTTTAACTTATGAATACTCCGAACCCCCACGGCTGGTGCATAGACTAGACAAAGATTGTACTGGCATTTTGGTGATGGGAAGAACACAGACAAGTGCTACAATTCTGCATTCCATATTCCGGGAGAAAACTTTCAGGGCATCTGATGATATTGGCAAGGAAAAAAGAGTCCTACAAAGAAGGTACGTGGCTCTAGTCATTGGATGTCCAAGACGTCGAAGGGGGCTGGTTACTGCTTCACTGGGTAAGGTGGTGGTAGGCAATGGGAAAGCTGATCGAATAACCACCATTGACAATtcttcagaattatcatcacaGCATGCAATTACAGAGTACCGAGTGATTGGATCATCATCGCATGGTTACACGTGGTTGGAGCTATCACCATTAACGGGTAGAAAACACCAGCTTCGTGTCCACTGTGCCGAGGTGTTAGGAACACCAATAGTTGGAGACTACAAGTATGGATGGCAAGCTCATAGGAGATGGAAACATTTTGATCTTCCGGATTCGGAGGGCACGAGTGAAGAGCTTCCTGATGAAAGAACACTACCCTTTGGTCTCAATATGAACAAGGGTAGTATTTCTGAGAAGCATCCTCATCTACATCTTCATTGTAAGCATATAGTGTTGCCAAATGTATCTCAGGCTCTGCAAAACGTGCAGTCGTCTTCCGACTATGATCTTTCAGACGTGGAAAGCCTCGAGTTTGTTGCGCCTTTGCCTCCATACATGCGAAGAAGCTGGGATCTCACGAAGTCCTGA 1434 0.4707 MAELILLRLIKLLSPPSSPTTHVARRLCFSSFGSCPNRCYSNAADDTLNEAKRPRKHAKWLTLPPFTATVNGSDLGKELSGRRSEVKRSVSATSTITALKWVLRCCPELPRSLVQKLFRLRQVRRESAAVENKTEETQAPEHRLKRVAAKDTLNLGDRIFLPVTVKETPAEKLESDITAEETKFIHSLVLYKDPAILVLNKPPGMSVQGGINVSRSLDEVAAACLTYEYSEPPRLVHRLDKDCTGILVMGRTQTSATILHSIFREKTFRASDDIGKEKRVLQRRYVALVIGCPRRRRGLVTASLGKVVVGNGKADRITTIDNSSELSSQHAITEYRVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWKHFDLPDSEGTSEELPDERTLPFGLNMNKGSISEKHPHLHLHCKHIVLPNVSQALQNVQSSSDYDLSDVESLEFVAPLPPYMRRSWDLTKS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0532 477 CDD PseudoU_synth_RluA_like 196 387 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Sto2g0532 477 Gene3D Pseudouridine synthase 178 447 - -
Sto2g0532 477 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 47 475 - -
Sto2g0532 477 PANTHER RNA PSEUDOURIDINE SYNTHASE 3, MITOCHONDRIAL 47 475 - -
Sto2g0532 477 Pfam RNA pseudouridylate synthase 196 365 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Sto2g0532 477 SUPERFAMILY Pseudouridine synthase 185 473 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0532 Sto-Chr2 4571536 4575819 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0532 - - qsu:112035965 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0532 2 4571536 4575819 Sto2g0532 2 4571536 4575819 ECH