Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0518 TTGCGCATGCTCCGTACTGTGACCTCCGCCACCGTGTCGGAACCTGCCACCGGGAAGCCGCTCCGAGGCATCATGAGGCCCCGCAGAGTCTCGCCGGAGATGCAGGACCTCGTTGGCGTTCCTGAGATTTCGCGAACCCAAGCACTCAAGCAGATTTGGGCCTACATTAAGGAGAACAATCTTCAGGACCCTGAAAACAAGAAGTTTATCATCTGTGATGAGAAGCTGAAGAAGATATTTGGTGGGAAAGATCGAATTGGCTTTCTTGAGATTGCTGGATTGATTAGCCCCCACTTTCTTAAATGA 306 0.5131 LRMLRTVTSATVSEPATGKPLRGIMRPRRVSPEMQDLVGVPEISRTQALKQIWAYIKENNLQDPENKKFIICDEKLKKIFGGKDRIGFLEIAGLISPHFLK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0518 101 Pfam SWIB/MDM2 domain 27 99 IPR003121 -
Sto2g0518 101 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 2 100 - -
Sto2g0518 101 Gene3D SWIB/MDM2 domain 20 101 IPR036885 -
Sto2g0518 101 SUPERFAMILY SWIB/MDM2 domain 20 101 IPR036885 -
Sto2g0518 101 MobiDBLite consensus disorder prediction 1 15 - -
Sto2g0518 101 PANTHER EXPRESSED PROTEIN-RELATED 2 100 - -
Sto2g0518 101 MobiDBLite consensus disorder prediction 1 23 - -
Sto2g0518 101 CDD SWIB-MDM2_like 28 99 - -
Sto2g0518 101 SMART swib_2 24 101 IPR019835 -
Sto2g0518 101 ProSiteProfiles SWIB/MDM2 domain profile. 23 101 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0518 Sto-Chr2 4454001 4456400 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Sto2g0518 SWIB 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0518 - - jre:109014199 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0518 2 4454001 4456400 Sto2g0518 2 4454001 4456400 ECH