Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0504 ATGAAGCTTAAGAGATCGTCGCTTAGGATGTTTCTAGGGTTTCTATTGTTGTCCTTCATGATGCCCTCATCGCTGGCGAGATTCGTGGTGGAGAAGAACAGCTTGATGGTGACGTCGCCGGAGAAGATTAAAGGCACACACGATAGTGCAATTGGAAACTTCGGGATTCCTCAGTATGGTGGTAGTATGGCTGGGAACGTCGTTTACCCGAAGGAGAACCAGAAGGGTTGTATTGAGTTTGGGGATTCCTTCAAATCGAAGCCTGGAGCTCTTCCAACCATCCTTTTACTCGATCGTGGAAGTTGCTTCTTCGCTTTGAAGGTATGGAATGCCCAGAAAGCTGGAGCTTCTGCGGTTCTTGTTGCAGATGATATCGAGGAACCCTTAATAACCATGGACACTCCTGAAGAGGAAAGATCATCTGCAAAATACATAGAAAATATTACAATACCATCTGCTCTCATTGAAAAAAGTTTTGGTGAATCATTAAAGAAAGCCATAAGTGGTGGGGATATGGTCAATGTAAATCTTGATTGGAGAGAGGCAGTCCCACACCCAGATGATCGTGTAGAGTACGAGTTGTGGTCCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGCTGATGGAATTTGTGAAGGATTTCAAGGGTCCAGCACAGATATTAGAGAAAGGCGGTTACACACAGTTTACACCCCATTATATAACTTGGTACTGTCCACAGGCATTCACATTAAGCAAACAGTGCAAGTCACAGTGCATAAATCATGGAAGATATTGTGCTCCTGATCCTGAGCAAGACTTCAGCACAGGTTATGATGGGAAAGACGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTTAAAGTGGCAAATGAAACCAAAAAGCCTTGGGTATGGTGGGACTACGTGACTGATTTTCAGATTAGATGTCCCATGAAGGAGAAAAAATACAATAAGGAATGTGCAGATGCTGTTATTAGATCACTTGGACTTGACATTAAAAAGATTGAAAAATGCATGGGAGATCCAGATGCTGATTCTGACAATCCTCTGTTGAAAGAAGAGCAAGACGCTCAAATTGGGAAGGGATCACGAGGTGATGTTACAATATTGCCAACTCTTGTTGTCAATAATCGACAGTATCGAGgaAAATTGGAGAAAGGTGCTGTTCTAAAGGCCATTTGTTCTGGATTTGAGGAAACCACTGAACCAACTGTTTGTTTGAGCAGTGATGTGGAGACAAATGAGTGCCTAGATAACTATGGTGGGTGTTGGCAGGATAAAGGAGCCAATATTACTGCATGCAAGGATACATTTCGTGGGCGAGTATGTGAATGCCCCTTGGTTGATGGTGTGCAGTTCAAAGGAGATGGTTATACTATCTGTGAAGCCAGCGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCCCGTAACGGACATGCATTTTCTGCTTGTTCGGATAATGGGGGTGCTAAATGCCAATGTCCTGTAGGGTTTAAAGGTGATGGTGTAAAAAATTGTGAAGATATTGATGAATGCAAAGAGAGGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATGACTGCAGTTGTAGTGGAGATCTTCTGTACATCAGGGACCATGATACCTGCATAAGCAAAACAGCCAGTGAGGGAAGATCATCTACCTGGGCTGCTTTCTGGGTCATTTTAGTCGGCTTGGCTATGGCTGCTGGAGGAGCATATCTCATCTACAAGTATAGAATAAGGTCATACATGGATTCTGAAATCAGAGCTATAATGGCACAGTATATGCCATTGGACAGCCAAGGAGAAGTTCATAGTCATGTCAATGATGAAAGAGCATGA 1887 0.433 MKLKRSSLRMFLGFLLLSFMMPSSLARFVVEKNSLMVTSPEKIKGTHDSAIGNFGIPQYGGSMAGNVVYPKENQKGCIEFGDSFKSKPGALPTILLLDRGSCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEERSSAKYIENITIPSALIEKSFGESLKKAISGGDMVNVNLDWREAVPHPDDRVEYELWSNSNDECGVKCDMLMEFVKDFKGPAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVIRSLGLDIKKIEKCMGDPDADSDNPLLKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPTVCLSSDVETNECLDNYGGCWQDKGANITACKDTFRGRVCECPLVDGVQFKGDGYTICEASGPGRCKINNGGCWHEARNGHAFSACSDNGGAKCQCPVGFKGDGVKNCEDIDECKERKACQCPECSCKNTWGSYDCSCSGDLLYIRDHDTCISKTASEGRSSTWAAFWVILVGLAMAAGGAYLIYKYRIRSYMDSEIRAIMAQYMPLDSQGEVHSHVNDERA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0504 628 CDD PA_VSR 53 177 - -
Sto2g0504 628 Pfam Complement Clr-like EGF-like 499 519 IPR026823 -
Sto2g0504 628 CDD EGF_CA 516 544 - -
Sto2g0504 628 Pfam PA domain 64 163 IPR003137 -
Sto2g0504 628 ProSitePatterns Calcium-binding EGF-like domain signature. 516 542 IPR018097 GO:0005509
Sto2g0504 628 ProSitePatterns EGF-like domain signature 2. 500 514 IPR000742 -
Sto2g0504 628 Gene3D - 25 186 - -
Sto2g0504 628 Gene3D Laminin 409 465 - -
Sto2g0504 628 SUPERFAMILY PA domain 93 169 IPR046450 -
Sto2g0504 628 SMART egfca_6 516 558 IPR001881 GO:0005509
Sto2g0504 628 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 16 607 - -
Sto2g0504 628 Gene3D Laminin 470 550 - -
Sto2g0504 628 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0504 Sto-Chr2 4322201 4330545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0504 26 628 Miscellaneous Gene Families AT2G14740 84.983 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0504 - - gmx:100776184 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0504 2 4322201 4330545 Sto2g0504 2 4322201 4330545 ECH