Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0503 ATGCACGACGATCGTGCATCTTTGACGCTAGGTGTggtggcaagaagaagaaggaggagggttGGGGTGGCTATAGCCACCACCCTCCCATTTTGTgacccttccctccccttccaaACTCGGGCCGCCGACCTCGTGTCCCGCCTCACACTCCAAGAAAAAGCCCAACAGCTTGTCAACTCGGCCTCAGCCATCCCCCGCCTCGGCATCCCTGCCTACGAGTGGTGGTCCGAGGCCCTCCACGGGGTCTCTGACCTAGGCCCGGGCACCCGCTTTGACAAACGGGTGCCAGGGGCCACAAGCTTCCCCGCGGTTATACTCTCGGGCGCCACATTCAACCAAAGCCTGTGGTTTGAAATGGGCCGAGTAGTGTCCACTGAGGCCCGGGCCATGTACAACGTGGGCCTGGCCGGGCTTACGTTCTGGAGCCCGAATGTGAATGTGTTTAGGGACCCGAGGTGGGGGAGAGGGCAGGAGACCCCGGGGGAGGACCCGTTGGTAGTGAGTGTGTACGGTGTGAAGTATGTTCGAGGGTTGCAAGAAGTggagagtgaagaagatgatgataggCTTAAGGTTTCAAGTTGTTGTAAGCATTATACTGCTTATGATCTTGATAATTGGAAAGGTGTGGATCGCTTTCACTTTGATGCAAAGGTGACAAAGCAAGACTTGGAGGACACATATCAGCCACCATTTAAGAAGTGTGTGGAAGAAGGACACGTCAGCAGTTTAAACCTGAACTGTGGAACCTATCTTGGAAAATACACAGCAAATGCAGTAAACACAAAAAAAGTAGACATATCCCTAGTGGACCAGGCCTTAATTTACAACTACATAGTCCTAATGAGACTGGGCTTCTTTGATGACCCAAAGTCCCACCCTTATGCAAGCCTAGGCCCATCAGATGTCTGCACAAAGCCCAACCAACAACTAGCCCTAGAAGCAGCAAAGCAAGGCATAGTCTTGCTAGAAAACCCAATGGGCTTTTTAATACCCTTATCCCAATCCACCACAAAAAGGCTTGCCCTAATAGGCCCAAATGCCAATGCCACCAAAGTGATGATAAGCAACTATGCTGGGGTGCCCTGTAGGTACACTAGCCCTCTACAAGGGCTAAAGAAGGTGAATTTGACATTGCCTGGGTTCCAAGAGAAGCTTGTGGAGGAAGTGTGTGAGGGTACAAATGGAATTGTGGTGTTGGTGATAATGGCAGCTGGTCCTATTGATGTTTCATTCACTAAGGGCAGTTTTGGGAAGAAAATTGGGGGGATTTTGTGGGTAGGGTACCCTGGTCAAGATGGAGGAGATGCCATTGCTCAAGTTATATTTGGAGACTACAATCCAGGTGTTAAGAACAACGGGCCACGCGACGGGTCCCATGTGGTGCTCGTGTTTTGGGCCCCACCGGGCGAGCTAATCCCTGGGGCTCCGATCACCCAACTGGTGGGGTTTGAGAGAGTAGAAGTGAAGGTTGGGAAGATAGAGTTTGTGAATGTGAAGATTAATGTGTGCCATGAGCTTAGTGTTGTGGATGGTGATGGAGAAAGGAAAGTGGTGATTGGGAAACATAGGGTTTTGGTTGGAGCATCTAGTGATGAGACTCAAATGACACACCAAATTGATGTTGAACTCTCAGGAGGAAATGGGAATATTTTTGGTGAAgaagaaatacaaaatatgGAAGTGTTGGCTATTTAA 1701 0.4744 MHDDRASLTLGVVARRRRRRVGVAIATTLPFCDPSLPFQTRAADLVSRLTLQEKAQQLVNSASAIPRLGIPAYEWWSEALHGVSDLGPGTRFDKRVPGATSFPAVILSGATFNQSLWFEMGRVVSTEARAMYNVGLAGLTFWSPNVNVFRDPRWGRGQETPGEDPLVVSVYGVKYVRGLQEVESEEDDDRLKVSSCCKHYTAYDLDNWKGVDRFHFDAKVTKQDLEDTYQPPFKKCVEEGHVSSLNLNCGTYLGKYTANAVNTKKVDISLVDQALIYNYIVLMRLGFFDDPKSHPYASLGPSDVCTKPNQQLALEAAKQGIVLLENPMGFLIPLSQSTTKRLALIGPNANATKVMISNYAGVPCRYTSPLQGLKKVNLTLPGFQEKLVEEVCEGTNGIVVLVIMAAGPIDVSFTKGSFGKKIGGILWVGYPGQDGGDAIAQVIFGDYNPGVKNNGPRDGSHVVLVFWAPPGELIPGAPITQLVGFERVEVKVGKIEFVNVKINVCHELSVVDGDGERKVVIGKHRVLVGASSDETQMTHQIDVELSGGNGNIFGEEEIQNMEVLAI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0503 566 Gene3D - 28 247 IPR036962 GO:0004553|GO:0005975
Sto2g0503 566 Pfam Glycosyl hydrolase family 3 N terminal domain 94 240 IPR001764 GO:0004553|GO:0005975
Sto2g0503 566 Gene3D - 376 451 IPR036881 GO:0004553|GO:0005975
Sto2g0503 566 SMART Fn3_like_2 461 532 IPR026891 -
Sto2g0503 566 SUPERFAMILY (Trans)glycosidases 29 320 IPR017853 -
Sto2g0503 566 PANTHER BETA-D-XYLOSIDASE 5-RELATED 27 245 - -
Sto2g0503 566 PANTHER BETA-D-XYLOSIDASE 5-RELATED 245 375 - -
Sto2g0503 566 PANTHER BETA-D-XYLOSIDASE 5-RELATED 373 450 - -
Sto2g0503 566 PANTHER BETA-D-XYLOSIDASE 5-RELATED 451 540 - -
Sto2g0503 566 Gene3D Immunoglobulins 452 546 IPR013783 -
Sto2g0503 566 Pfam Glycosyl hydrolase family 3 C-terminal domain 377 451 IPR002772 GO:0004553|GO:0005975
Sto2g0503 566 Gene3D - 310 375 IPR036881 GO:0004553|GO:0005975
Sto2g0503 566 Gene3D - 251 309 IPR036962 GO:0004553|GO:0005975
Sto2g0503 566 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 321 450 IPR036881 GO:0004553|GO:0005975
Sto2g0503 566 PANTHER SUGAR HYDROLASE-RELATED 27 245 IPR044993 GO:0009044|GO:0045493
Sto2g0503 566 PANTHER SUGAR HYDROLASE-RELATED 451 540 IPR044993 GO:0009044|GO:0045493
Sto2g0503 566 PANTHER SUGAR HYDROLASE-RELATED 373 450 IPR044993 GO:0009044|GO:0045493
Sto2g0503 566 PANTHER SUGAR HYDROLASE-RELATED 245 375 IPR044993 GO:0009044|GO:0045493
Sto2g0503 566 Pfam Fibronectin type III-like domain 461 532 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0503 Sto-Chr2 4309228 4319341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0503 451 529 Glycoside Hydrolase AT5G49360 40.000 3.58e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0503 K15920 - atr:18422386 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0503 2 4309228 4319341 Sto2g0503 2 4309228 4319341 ECH