Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0501 ATGTCCACATTTTTGGAAGAGGATGAAATGAAAtgcaaaatgtATCTGCACTTTAACAGATCCGAATCCCACATTTTcgagattggatccgGCCATCATGTGATTCAGAATCTGAAGCAAAACGGAGAGTTGTTCGATGAATGGGATTGGGAGAAACAAGTTCCTTCCTTGCCATCAGCCGCATATTCTTTACTTCGTTCCAGCTTCAAAAGACCACTCTCTTCATCTGTTCACTCTGTGTTCCACTCTTCGGATAACCTAACCACCAAGCTCCTCATTAAGCTCCATAATGGAGCTTTTGTGGAGACTGTGATAATGAGGTATGACACACGTTTGGGAAAATATGGTGGTAAACCTCGTCCTGGTGGTCTAAGATCAACTTTGTGTATATCTTCGCAGGTAGGTTGCAAAATGGGTTGCAAATTTTGTGCAACTGGAAGTATGGGATTCAAAAACAACTTAACATCTGGAGAGATAGTGGAACAATTAGTTCATGCCTCTTGTTTATCTCAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTCTGAATAATTATTCTGCCTTGGTGGAATCTATTCGTGTCATGACTGGATTGCCATTTCAATTGTCATTGAAAAGGATTACTGTCTCAACGGTAGGTATCATTCACGGTATCAACAAGCTTCATAATGACCTTCCCGGTTTGAACTTGGCAATCTCATTGCATGCACCAGTCCAGGACATCCGTTGCCAGATAATGCCTGCAGCTCGTGCTTTCCCTTTGGAAAAACTAATGGATTCATTGCGAGAATATCAAAGAAACAGTCAGCAGAAAATCTTAATTGAGTACATAATGCTCGATGGGGTGAATGATGAAGAGCAACATGCCCACCAACTAGGGAAACTGATGGAGACGTTTCAAGTGGTAGTGAACTTAATTCCTTTCAACCCTATCGGTACGCTGAGTCAGTTCAGAACTAGTAGCGAGCAgaaagtatcaagttttcagaaaattCTAAGGGGCACCTATAATATTCGGACAACAGTTCGGAAGGAGATGGGTCAGGACATAAGTGGTGCTTGTGGGCAACTGGTGGTTAACGTACCTGACAAGAAATCTCCTGGGAGTGCAGGTCCCTTAACTGACATAGAAGATCTTGTTCTTAATATatag 1158 0.4059 MSTFLEEDEMKCKMYLHFNRSESHIFEIGSGHHVIQNLKQNGELFDEWDWEKQVPSLPSAAYSLLRSSFKRPLSSSVHSVFHSSDNLTTKLLIKLHNGAFVETVIMRYDTRLGKYGGKPRPGGLRSTLCISSQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASCLSQIRNVVFMGMGEPLNNYSALVESIRVMTGLPFQLSLKRITVSTVGIIHGINKLHNDLPGLNLAISLHAPVQDIRCQIMPAARAFPLEKLMDSLREYQRNSQQKILIEYIMLDGVNDEEQHAHQLGKLMETFQVVVNLIPFNPIGTLSQFRTSSEQKVSSFQKILRGTYNIRTTVRKEMGQDISGACGQLVVNVPDKKSPGSAGPLTDIEDLVLNI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0501 385 Gene3D Aldolase class I 76 367 IPR013785 -
Sto2g0501 385 SFLD methyltransferase (Class A) 58 367 - -
Sto2g0501 385 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 43 377 - -
Sto2g0501 385 CDD Radical_SAM 135 336 - -
Sto2g0501 385 SFLD adenosine C2 methyltransferase (RlmN-like) 58 367 IPR004383 GO:0006364|GO:0008173
Sto2g0501 385 PANTHER 23S RRNA METHYLTRANSFERASE 43 377 IPR040072 -
Sto2g0501 385 SUPERFAMILY Radical SAM enzymes 126 301 - -
Sto2g0501 385 ProSiteProfiles Radical SAM core domain profile. 122 351 IPR007197 GO:0003824|GO:0051536
Sto2g0501 385 PIRSF Cfr 32 374 IPR004383 GO:0006364|GO:0008173
Sto2g0501 385 Pfam Radical SAM superfamily 131 289 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0501 Sto-Chr2 4299729 4304590 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0501 - - ccaj:109814608 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0501 2 4299729 4304590 Sto2g0501 2 4299729 4304590 ECH