Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2509 ATGTCTCGCCCTCCAAACTACGAGTTTCAGGAATGGTGGAACAAGCAGAGAGAGAAAAGCCACGAGCTTTTCGAGGACAAACCCGACGGGTCGCTTCACCCTTTTCTCACCGTCGACATCCAAAGCGTCTCTTCCGATCACTCGGTGGAGAAGGAGCGTGCTCGTAGTGCCCGTCAGCTCTCCTGGGTTTGTCTCTTGAGATTTCAGCAAATCGCCACCTCTCTTGCTTCCCTCTCCAATGGCTTCGTCTCATTACTCCGCACTGCCAACCGGAGGATCGCCTCGCCGGATTCGCGTGCCGATTCGGCGTCGTCGCGGCTCTATCGGGTAATCAAGGTCTTCTTGATTGTCGTTCTCCTCTTGCTTCTCTTTGAGCTCCTTGCTTACTTCAAAGGATGGCATTTCAGCCCGCCGTCCGCCACTTCGGCGGACGTGTCGGGGATGGTGGGTCTTATATATGCCAAATGGCTTGAGATTCGGGCGAATTACTTGGCGCCACCATTGCAGGGATTAACCAATATGTGCATTGTACTCTTCCTCGTTCAGTCGGTTGATCGGGTGATTTTGATCCTGGGATGTTGCTGGATCAAATTCCGGAGGCTGAAGCCTGTACCTGCTATGGAATATCCAATAAATTCTaagaatgaggatgtgaatgtGGAGGATTATCCAATGGTGTTAGTTCAAATTCCCATGTGCAATGAGAGGGAGGTTTATCACCAATCCATTGCGGCAGTTTGTATCCTGGATTGGCCGAAGGAGAGAATGCTTGTACAGGTCCTTGATGATTCTGATGAAGTAGATATCCAGCAGCTTATCATGGCAGAGGTACAGAAATGGCAACAAAGGGGTGTTCGAATTATATATAGGCATCGTCTTATACGTACAGGCTATAAGGCAGGGAATCTCAAATCAGCAATGAGTTGTGATTATGTTAAAGAATATGAGTTTGTGGCTATTTTTGATGCTGATTTTCAGCCAGCACCGGATTTCTTAAAAAAGACAATACCTCATTTCAAGGGGAATGATGATTTGGCATTGGTCCAGACACGGTGGGCTTTTGTAAACAAGGACGAGAACTTGCTTACAAGGCTGCAGAATATAAACTTATCTTTCCACTTTGAGGTTGAACAACAGTGCCTCTGTGAACTTCCTGAAACCTATGAGGCATATAAGAAGCAGCAACACCGCTGGCATTCTGGTCCAATGCAGTTGTTTCGTCTGTGTTTTGTTGATATACTTCGTTCAAAGGTCAGCGGGGTAAAGAAGGCCAATTTGATATTCCTTTTCTTCctcctaaggaagcttatcctGCCATTTTATTCATTTACCCTCTTCTGCATCATTCTTCCTTTGACCATGTTCCTCCCAGAAGCTGAGCTACCGTCATGGGTTGTTTGTTATGTTCCTGGAGTTATGTCTGTTCTAAGTATTCTTCCATGTCCCCATTCATTTCCGTTTATAGTTCCTTACCTTCTATTTGAGAATACTATGTCGGTTACTAAATTTAATGCTATGATATCTGGATTATTTCGCTTTGGAAGTTCTTATGAGTGGGTGGTTACAAAAAAATTGGGAAGATCATCAGAGACAGATCTGGTTGCCTTTGAGAAGGAATCTGAGCCTCTAATGAGATCTACCAGTCTTCACAGATCATCTTCAGATTCAGGCATTGAGGAGCTAAGCAAACTAGAGTTATCAAAGAAAACAGTGAAACCCAAGAAAAACCGTTTGTACAGGAAAGAACTTGCTCTTGCATTTATATTGCTAACGGCCTCGGTTAGAAGCTTATTATCAGCTCAAGGAATTCACTTTTACTTCCTGTTATTTCAAGGAATAAGCTTTCTGGTTATTGGTCTTGATTTGATTGGGGAGCAGGTTAGTTGA 1887 0.4361 MSRPPNYEFQEWWNKQREKSHELFEDKPDGSLHPFLTVDIQSVSSDHSVEKERARSARQLSWVCLLRFQQIATSLASLSNGFVSLLRTANRRIASPDSRADSASSRLYRVIKVFLIVVLLLLLFELLAYFKGWHFSPPSATSADVSGMVGLIYAKWLEIRANYLAPPLQGLTNMCIVLFLVQSVDRVILILGCCWIKFRRLKPVPAMEYPINSKNEDVNVEDYPMVLVQIPMCNEREVYHQSIAAVCILDWPKERMLVQVLDDSDEVDIQQLIMAEVQKWQQRGVRIIYRHRLIRTGYKAGNLKSAMSCDYVKEYEFVAIFDADFQPAPDFLKKTIPHFKGNDDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRSKVSGVKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPSWVVCYVPGVMSVLSILPCPHSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSTSLHRSSSDSGIEELSKLELSKKTVKPKKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGISFLVIGLDLIGEQVS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2509 628 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 214 383 IPR029044 -
Sto1g2509 628 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 379 627 - -
Sto1g2509 628 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 30 379 - -
Sto1g2509 628 SUPERFAMILY Nucleotide-diphospho-sugar transferases 223 445 IPR029044 -
Sto1g2509 628 PANTHER - 379 627 - -
Sto1g2509 628 PANTHER - 30 379 - -
Sto1g2509 628 Pfam Glycosyl transferase family 2 229 372 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2509 Sto-Chr1 32528769 32535751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2509 1 628 Miscellaneous Gene Families AT3G07330 64.099 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2509 - - ming:122067556 911.368