Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto1g2484 | ATGTATGCTGATCGGGTGGAGTCTGGAGCGAGGAGGTCAGTAAGGGATCGTCTGAACGAgaattttggcagtgactctacTCGGCAACGGTCTATCACCGGGAAGAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTTTTTGAGGATGATAAACCACGAGTTTCTAATCGCCAAGTTACTGCTCAAGATCTTCGTCTGAAGCTTCAAAAGAAAGGTCTTCAACCAGCATCTCAGGGTGGAAAGAATTCCATTCCAGGTATGCGTGATCTACGTGAGAAGTTATCAGGGACAATGACTACGCAGCCTAAAAACTCTGATCCACCAAAGTCAAAAGTGGAAGCTGTTAAACCAAGCAGTAAAAGTATCATTGTTGAGGCACCTGCATCACAGATTAAAAGAGCAGCTAACCCAGCTCCCAAAAAGAAGGCTTCCCAAAAGGCTGATTCTTCAGTGGATGGATTTTTGCTGTCCCTGGGTCTTGAGAAGTATCTCATAACATTTCAAGCTGAAGAAGTTGATATGACAGCTCTCATGCACATGACTGATGAGGATCTTAAGGCTATGGGTATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAATCGAAGGGTTGA | 624 | 0.4327 | MYADRVESGARRSVRDRLNENFGSDSTRQRSITGKRQRQDDKWEHDLFEDDKPRVSNRQVTAQDLRLKLQKKGLQPASQGGKNSIPGMRDLREKLSGTMTTQPKNSDPPKSKVEAVKPSSKSIIVEAPASQIKRAANPAPKKKASQKADSSVDGFLLSLGLEKYLITFQAEEVDMTALMHMTDEDLKAMGIPMGPRKKILLALESKG | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto1g2484 | 207 | CDD | SAM_superfamily | 151 | 204 | - | - | |
| Sto1g2484 | 207 | Pfam | SAM domain (Sterile alpha motif) | 146 | 204 | IPR001660 | GO:0005515 | |
| Sto1g2484 | 207 | ProSiteProfiles | SAM domain profile. | 147 | 201 | IPR001660 | GO:0005515 | |
| Sto1g2484 | 207 | Gene3D | - | 149 | 207 | IPR013761 | - | |
| Sto1g2484 | 207 | MobiDBLite | consensus disorder prediction | 1 | 122 | - | - | |
| Sto1g2484 | 207 | MobiDBLite | consensus disorder prediction | 31 | 57 | - | - | |
| Sto1g2484 | 207 | SMART | SAM_4 | 144 | 207 | IPR001660 | GO:0005515 | |
| Sto1g2484 | 207 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Sto1g2484 | 207 | PANTHER | PA-PL1 PHOSPHOLIPASE FAMILY | 1 | 194 | - | - | |
| Sto1g2484 | 207 | PANTHER | OSJNBA0060P14.15 PROTEIN | 1 | 194 | - | - | |
| Sto1g2484 | 207 | SUPERFAMILY | SAM/Pointed domain | 149 | 204 | IPR013761 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto1g2484 | Sto-Chr1 | 32359036 | 32361169 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto1g2484 | 37 | 206 | Glycosyltransferase | AT3G07170 | 65.882 | 4.23e-71 | 212 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto1g2484 | - | - | gmx:100527300 | 289.656 |
Event-related genes