Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2345 ATGCATGAAGACCTCAAGACAGCAGCCAAGAATGTCAACTATTGGTCAGGCGTCACCACCTTGATGCCTCTCTTTGGAGGCTTCTTCGCTGACGCCTATTTGGGTCGCTATTTCACTGTTGTTCTCTCCTGCATTGTTTATCTTATgGGGTTGGTTCTTCTTTCCATGTCGTGGTTCTTGCCAGTTTTAAAGCCTTGTGACACAAGCACTACGTGCAGCGAACCACGGAAGGTTCATGAGGTGTTCTTCTTCCTTGCCATATACTTAATCTCCGTAGGAACCGGAGGGCACAAGCCGTCGTTGGAGAGCTTCGGAGCAGACCAGTTCGACGACAATCACGCCGGAGAGAGGCGGCAGAAGCTGTCCTTTTTCAATTGGTGGAACTGTGGGCTATGCAGTGGGCTCATTCTAGGGGTCACCCTAATTGTTTATGTGCAGGAACATGTGAATTGGGGGGCTGCTGATATCATCCTCACAGGGGTCATGGCtttgtctttgctcatttttGTGATGGGAAGGACCTTTTATAGGTATAGGGCACCCTCTGGCAGCCCATTGACCCCAATGTTGCACGTTCTTGTTGCTGCCTTTTCTAAAAGGAACCTTCCCTACCCTTCCAATCCTTCTCAGTTCTATGAAGTTCCCAAGTCTCAATCCACACGTCCAAGACTTCTCTCTCAAACCAACAAACTCAAATTTCTTGACAAGGCTGCAATTGTTGAAGCTGGAGATTCGGCGGAGAAGCAGAGTCCATGGAGACTATCAACAGTAACAAAAGTAGAAGAAATGAAGCTAATAATAAACATGATCCCCATATGGGTATTCACACTCCCTTTCGGGATGTGCGTGGCTCAAACCTCCACCTTCTTCATCAAACAAGCAACCACCTTAAACCGAAACATAGGATCCACAAACAACAACAACTTCCAGATCCCCCCTGCCACCATCTACGCCCTCTCTGCCCTCGGAATGATCATCTCCGTCGCCATCTACGACAAAATCCTCGTACCCCTCTCCAGAAAACTCACCCACACCGAACGAGGCATCACCATCCTCCAAAGAATCGGCTTCGGAATGCTCTTTTCCGTCGCCACAATGGTCATAGCAGCTCTGGTCGAGAACAAGAGGCTCCGAGTGGTTCATAGCAACCCCAAAGAAGTGGGGTCCCTCTCTATGTCCGTCTTCTGGTTGGCTCCTCAATTTTTGGTCATAGGTTTCGGCGACGGTTTCACTCTCGTTGGCCTACAAGAGTATTTCTACGACCAAGTGCCGGATAGTATGAGGAGTTTGGGGATTGCTCTGTATCTTAGTGTGATTGGGGCGGCCAATTTTTTGAGCAGCGTTGTGATAAGTATTGTGGATGGTGTGACGGAGAAGGGAGGGAAGAGTTGGTTTGGGAAGGATTTGAATAGTAGTAGATTGGATAGGTTTTATTGGTTGCTTGCGGGAATTACGACCGTGAatttgtgtgtgtttgtgttCGTTGCTCGTAGGTATTCCTACAAGAATGTTCAGAAGGATGCTTTGGTGGCGGATTGTTATGAAGGCAAAAGTGACGATGGAGATAAAGGGACTACTATAGTATAA 1587 0.4701 MHEDLKTAAKNVNYWSGVTTLMPLFGGFFADAYLGRYFTVVLSCIVYLMGLVLLSMSWFLPVLKPCDTSTTCSEPRKVHEVFFFLAIYLISVGTGGHKPSLESFGADQFDDNHAGERRQKLSFFNWWNCGLCSGLILGVTLIVYVQEHVNWGAADIILTGVMALSLLIFVMGRTFYRYRAPSGSPLTPMLHVLVAAFSKRNLPYPSNPSQFYEVPKSQSTRPRLLSQTNKLKFLDKAAIVEAGDSAEKQSPWRLSTVTKVEEMKLIINMIPIWVFTLPFGMCVAQTSTFFIKQATTLNRNIGSTNNNNFQIPPATIYALSALGMIISVAIYDKILVPLSRKLTHTERGITILQRIGFGMLFSVATMVIAALVENKRLRVVHSNPKEVGSLSMSVFWLAPQFLVIGFGDGFTLVGLQEYFYDQVPDSMRSLGIALYLSVIGAANFLSSVVISIVDGVTEKGGKSWFGKDLNSSRLDRFYWLLAGITTVNLCVFVFVARRYSYKNVQKDALVADCYEGKSDDGDKGTTIV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2345 528 Gene3D MFS general substrate transporter like domains 1 508 IPR036259 -
Sto1g2345 528 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 513 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g2345 528 Pfam POT family 38 461 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g2345 528 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 1 513 - -
Sto1g2345 528 SUPERFAMILY MFS general substrate transporter 18 502 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2345 Sto-Chr1 31384286 31386061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2345 1 512 Organic Solute Cotransporters AT3G53960 62.476 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2345 - - gmx:100806045 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0584 6 6228389 6233994 Sto1g2345 1 31384286 31386061 CCT
Sto1g2345 1 31384286 31386061 Sto1g2345 1 31384286 31386061 ECH