Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2339 ATGGACTTCTCAGGGAGCAGCAAGAACGCTCTGAAATGGTCTTTTGAAAATCTGGGTGATAAAGGTGACACCTTTTACATCATCCATGTCAGCCCCAATTCCCTCGATGAGTCTCGCAATAAGCTCTGGGCTCAATCTGGCTCTCCTCTAATTCCACTGTCAGAGTTCAGAGAGCCAGAGGTGATGAAGAAGTACGATGTTAAAGCTGATATTGAGGTTCTTGATATACTCGATACTGAATCAAGACAGAAAGAGAAGCTTTTGGATGCCATTGAAGATCTCAAGTTGGATTCTCTCATTATGGGAAGCAGAGGTCTAGGCACTATTCAAAGGATCATAATGGGAAGTGTGAGCAACTTCGTGATAACACATGCACCTTGCCCTGTGACTATTGTGAAGGATTTGAGCGAAAGCAGCAGCAGCAAGaagtaa 432 0.4375 MDFSGSSKNALKWSFENLGDKGDTFYIIHVSPNSLDESRNKLWAQSGSPLIPLSEFREPEVMKKYDVKADIEVLDILDTESRQKEKLLDAIEDLKLDSLIMGSRGLGTIQRIIMGSVSNFVITHAPCPVTIVKDLSESSSSKK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2339 143 Coils Coil 77 97 - -
Sto1g2339 143 CDD USP_Like 1 132 - -
Sto1g2339 143 Pfam Universal stress protein family 1 133 IPR006016 -
Sto1g2339 143 PRINTS Universal stress protein signature 93 105 IPR006015 -
Sto1g2339 143 PRINTS Universal stress protein signature 111 133 IPR006015 -
Sto1g2339 143 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 133 - -
Sto1g2339 143 Gene3D HUPs 1 143 IPR014729 -
Sto1g2339 143 PANTHER IMP2'P 1 137 - -
Sto1g2339 143 PANTHER OS05G0453700 PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2339 Sto-Chr1 31268917 31269969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2339 1 132 Receptor kinase-like Gene Family AT5G35380 28.467 8.33e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2339 - - gmx:100306513 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0576 6 6166321 6168033 Sto1g2339 1 31268917 31269969 CCT
Sto1g2339 1 31268917 31269969 Sto1g2339 1 31268917 31269969 ECH