Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2303 ATGAAGAACACCAGAAGGCTATGTTCAAGTAAGCCCATAGTTACCATTAATGGAAAGTTTCCAGGGCCCACATTATACGCAAGAGAAGATGACACAGTGCTTGTCAAAGTCGTCAACCGTGTTAAGCACAACGTTAGCATCCActgGCACGGTGTCCGGCAATTGCGAACCGGTTGGGCCGATGGGCCGGCCTATATCACGCAGTGTCCGATCCAGCCGGGGCAGAGCTATGTGTACAACTTCACCATTACAGGGCAAAGAGGCACACTTCTATGGCATGCACATGTTAATTGGCTAAGGGCTACGGTCCATGGTGCCCTTGTAATCTTGCCAAAGCGTGGGGTGCCTTATCCCTTTCCAAAACCAGATGATGAGTTAGTTGTGGTCTTAGgaGAATGGTGGAAATCTGATACTGAAGCTGTCATCAATGAAGCTCTCAAATCAGGATTAGCACCTAATGTCTCAGATGCTCACACTATTAATGGCCTTCCAGGGACTGTGGCCAATTGTTCTACACAAGATGTATTCAACCTACCTATAGAAAGTGGGAAGACATATTTATTAAGGATCATCAATGCTGCACTCAATGAGGAACTCTTCTTCAAGATCGCAGGCCACAACCTTACTATAGTAGAAGTAGATGCTACCTACATTAAACCCTTCAATATTGATACTATTGTAATTGCTCCTGGACAAACCACTAATGCTCTCTTAACTGCACACCAAAAATCTGGAAAATACTTACTCACAGCTTCTCCTTTCATGGATGCTCCTGTTGCTGTAGATAACTTAACTGCCACAgccacacttcactacacaggCACTCTCTCTACTTCTCCCACAATTCTCACTACCCCACCTCCTAAAAATGCCACCCAAATAGCCAATCATTTTATTGACTCTCTCAAAAGCCTGAATTCCCCAAAATACCCCGCAAAAGTCCCATTCAAGATTGACCATTCTCTGTTTTTCACAGTGGGTTTGGGGGTCAACCCTTGCCCTTCTTGTAAAGCAGGCAATGGAAGCAGGGTGGTGGCCTCTGTGAATAACGTCACTTTTGTGATGCCAAACACGGCCTTACTTCAGGCCCATTATTTCAACACACCAGGGGTTTTTACCACTGATTTCCCAGGGAATCCACCTCATGTGTTTAATTACTCGGGTAGTCCACCTAAGAATTTGCAGACACAAAGTGGGACAAAGCTTTATAGAGTGGGTTATAATGAGACGGTTCAAGTGGTGATGCAAGATACAGGAATAATTGCTCCAGAGAACCACCCGGTTCATCTTCATGGTTTCAATTTCTTTGTGGTGGGCAGAGGTGTAGGGAATTATGACCCAAACAAGGATCCTAACAAGTTTAACTTAGTTGATCCTGTGGAAAGAAATACAGTTGGAGTTCCTTCTGGTGGGTGGACTGCCATTAGATTCAGAGCAGATAATCCAGGAGTTTGGTTCATGCATTGTCATTTGGAGGTGCATACAACATGGGGGCTAAAGATGGCATTTTTGGTGGACAATGGAAAAGGTCCTAAAGAATCTTTGATTCCACCACCCAAAGATCTTCCAAAATGCTGA 1578 0.4373 MKNTRRLCSSKPIVTINGKFPGPTLYAREDDTVLVKVVNRVKHNVSIHWHGVRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLLWHAHVNWLRATVHGALVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAVINEALKSGLAPNVSDAHTINGLPGTVANCSTQDVFNLPIESGKTYLLRIINAALNEELFFKIAGHNLTIVEVDATYIKPFNIDTIVIAPGQTTNALLTAHQKSGKYLLTASPFMDAPVAVDNLTATATLHYTGTLSTSPTILTTPPPKNATQIANHFIDSLKSLNSPKYPAKVPFKIDHSLFFTVGLGVNPCPSCKAGNGSRVVASVNNVTFVMPNTALLQAHYFNTPGVFTTDFPGNPPHVFNYSGSPPKNLQTQSGTKLYRVGYNETVQVVMQDTGIIAPENHPVHLHGFNFFVVGRGVGNYDPNKDPNKFNLVDPVERNTVGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPKESLIPPPKDLPKC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2303 525 CDD CuRO_2_LCC_plant 127 272 IPR034285 -
Sto1g2303 525 ProSitePatterns Multicopper oxidases signature 1. 483 503 IPR033138 -
Sto1g2303 525 Gene3D - 122 307 IPR008972 -
Sto1g2303 525 CDD CuRO_3_LCC_plant 371 508 IPR034289 GO:0005507
Sto1g2303 525 Gene3D - 335 525 IPR008972 -
Sto1g2303 525 CDD CuRO_1_LCC_plant 1 111 IPR034288 GO:0005507
Sto1g2303 525 SUPERFAMILY Cupredoxins 315 525 IPR008972 -
Sto1g2303 525 SUPERFAMILY Cupredoxins 6 140 IPR008972 -
Sto1g2303 525 ProSitePatterns Multicopper oxidases signature 2. 488 499 IPR002355 GO:0005507
Sto1g2303 525 TIGRFAM laccase: laccase 1 525 IPR017761 GO:0046274|GO:0048046|GO:0052716
Sto1g2303 525 PANTHER LACCASE 1 525 - -
Sto1g2303 525 Pfam Multicopper oxidase 3 112 IPR011707 GO:0005507
Sto1g2303 525 Gene3D - 4 118 IPR008972 -
Sto1g2303 525 PANTHER MULTI-COPPER OXIDASE 1 525 IPR045087 -
Sto1g2303 525 Pfam Multicopper oxidase 125 274 IPR001117 -
Sto1g2303 525 SUPERFAMILY Cupredoxins 119 291 IPR008972 -
Sto1g2303 525 Pfam Multicopper oxidase 379 508 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2303 Sto-Chr1 30997510 30999677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2303 K05909 - gmx:100779825 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2303 1 30997510 30999677 Sto1g2303 1 30997510 30999677 ECH