Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2297 ATGATTAATACGGTGTCGTCCAAGTTAGGTGCTTGGTGGCGCATCCATGTCGTCTTCTCCAAGACTCTGTTTTTCATTTGCGTTTTGATCTCCTCCATAAGCTTTGTGGAATTCGCAGTGGCCACAGTAGTGGTGGATTACTTCACAGAAGTATTGAATTATGATATAGTAGAAGCTGCTGTTATTACTAATTTGACAGATGCCCTATTATCCCTCCTTGTTATTTTGCCTCGCTTTTCTGAAACTTATGTGGGTCGTTTCAATGTCATTACTTTTTATAGCGGAGCCTATGCTACGGGCTTAATGCTATTATGGGTCAACGAGGCTTGTGCATACACACAATCACAATTCTACATGTTTTTCTCTCTGGCTTTTCTACTACTTGTTTTAGGTAAATCCGGAAGTGAGTCAAGTTTACATAAGTTTCTCGAATACCAAatgaatgaaaaagtgaaaGGAATGAACCCAGAAAGTCAAAACATGGACACAGAGGAAGAGCAAGAAAAGAATGAAGTTCGTGTAGATTTAACTTGGATGGGGACTTTCAAGATTTCAGCACTTGTTATGGGAGGTGGGTATCAAATATTTTACTCCGGCTGCTTCTATTATACTCTTGAGAAACCCACgaaatgtgaagaagaagaaaacgaaTTTCAGTTCTTAAGAAAAATCTATGTAGTGTACAAGGCTGCTTTTAGGAAAAGGAAACAGGATTACCCTGTTTCACCAGATTCCTATTACTGGAAGGATCAGAGACAGAGCAATGTCTACTCAAAACGGGAAGGCCAAACTCAATTTTTACCCAAAGCGTTTGGGGTGTTAGACAAAGCTGCTATAATCATAGAAGCAAATAATCTCAAGGATGTGTACAGTGTGAAGGAAGTGAGGGAAGTAAAGCGATTTTCATCAGTGATAGTCTTGCTCTGTTCTATTTTACCGTACGGTTTAATGACCACCATAGCCTCCACTTTCTTTGTTCAGCAAGCAGAGACCATGAGATATAATTACAATACTTCTGCTTTGTTTGTAATGTCGTGTTGGATGCGTTGTGTTGTGACATGGTTCTTTTGGTGGAAGAATCTTGAGAAACAGAGCATCACAAAAGTGAGGATCTTTTGTGGGATGCTCTGTTCTGTGTTCTGCTGCTTCGTAGCATTTTGGGTAGAACATCATCGGCTGTCTTCCGATGATGTTGTCGATGGCTCATGGTTGATTCCTCAGTTTTTGCTATTGGGGTTAGCTGAAGCACTTGTGGAAGATGGGGTTGAGGTTTTTGTGTGCAATCACGTGCCTCCGTCAATGTGCAGATTTGGGGAGTTATTTACAGAGTTGCTATTCGCGGTAGGAAAGCTCCTAACTGTGGTATTTGCGTTAATTTTCCGTGGATTAGGGTGGTTTAAGGAATCCTTGGGTGATAGCAAATTGGAAAGGTATTATGTGTGGTTAGCGATACTAAATTTTGTGTTCCTTTTCATTTATGGGTACTACTCCAGGAATCATGCACTGAGTGAAGCTTACCCAGAGGATCAAGAATTGACGATGATGGAAGAATGA 1554 0.3977 MINTVSSKLGAWWRIHVVFSKTLFFICVLISSISFVEFAVATVVVDYFTEVLNYDIVEAAVITNLTDALLSLLVILPRFSETYVGRFNVITFYSGAYATGLMLLWVNEACAYTQSQFYMFFSLAFLLLVLGKSGSESSLHKFLEYQMNEKVKGMNPESQNMDTEEEQEKNEVRVDLTWMGTFKISALVMGGGYQIFYSGCFYYTLEKPTKCEEEENEFQFLRKIYVVYKAAFRKRKQDYPVSPDSYYWKDQRQSNVYSKREGQTQFLPKAFGVLDKAAIIIEANNLKDVYSVKEVREVKRFSSVIVLLCSILPYGLMTTIASTFFVQQAETMRYNYNTSALFVMSCWMRCVVTWFFWWKNLEKQSITKVRIFCGMLCSVFCCFVAFWVEHHRLSSDDVVDGSWLIPQFLLLGLAEALVEDGVEVFVCNHVPPSMCRFGELFTELLFAVGKLLTVVFALIFRGLGWFKESLGDSKLERYYVWLAILNFVFLFIYGYYSRNHALSEAYPEDQELTMMEE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2297 517 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 34 491 - -
Sto1g2297 517 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 34 491 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g2297 517 Gene3D MFS general substrate transporter like domains 16 505 IPR036259 -
Sto1g2297 517 Pfam POT family 172 452 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g2297 517 SUPERFAMILY MFS general substrate transporter 303 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2297 Sto-Chr1 30918803 30920602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2297 7 486 Organic Solute Cotransporters AT3G53960 24.908 2.76e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2297 - K14638 ccaj:109818666 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2297 1 30918803 30920602 Sto1g2297 1 30918803 30920602 ECH