Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2292 ATGTTGCCTCAGAAGCAGGCAGAGGAAGCCATAGTCACCAACTTCACCGAGACAGAGCATGATGGTACTGGCGTCGGCGTCATCCCGAGGGAAGAAGACAAGGACCAAGATAACTCCATCTTCACCCTCAAGAGCTTCCTCTGGCATGGCGGTTCTGTGTGGGACGCTTGGTTCAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTGTTGACGCTACCCTATTCCTTCTCTCAACTGGGTATGCTCTCAGGCATATTGCTTCAGATATTTTATGGGATGATGGGAAGCTGGACGGCTTATCTAATTAGTGTCCTCTATGTGGAATACCGAACCCGCAAGGAAAAGGAGAACGTTAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTGCTGGATGGATTACTGGGTCCGTACTGGAAAGCCGTGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTCGGATCTGTGATTCAGCTTATTGCTTGCGCAagTAACATATACTACATAAATGACAAATTGGACAAACGAACTTGGACTTATATCTTTGGAGCATGCTGTGCCACCACTGTGTTCATACCTTCCTTCCACAACTACCGAATCTGGTCGTTTTTTGGGTCTTGGAATGACCACTTACACGGCTTGGTATTTAGCTATAGCAGCGCTTGTTCACGgccagGCGGAAAATGTGACACACTCGGGTCCAACCAAGCTATGCTGTACTTCACCGGAGCCACTAATATACTGTACACCTTTGGTGGACACGCCGTTACTGTAGAGATCATGCACGCCATGTGGAAGCCTCAGAAGTTCAAGTACATTTATTTGTTGGCCACACTGTACGTCTTCACACTAACGCTTCCTTCCGCCTCCGCCGTTTACTGGGCTTTCGGCGACGAGCTTCTTAACCACGCCAACGCTTTCTCCCTCCTCCCCAAAACTGCCTTCCGTGATGCCGCCGTTATCCTCATGCTCATCCACCAgTTTGTGATTCCAATATGGTTCTTAGCTATCATCTTCCCTTTCTTTGGGCCCATCAACTCTGCTGTTGGAGCTCTTCTCGTTAGCTTCACTGTCTACATCATCCCGGCTTTAGCTCATATGCTCACCTACAGAAAACCCTCTGCAAGACAGAATGCAGCAGAGAAGCCTCCTGTCTCATGCCAAGCTGGACGGCTATGCAAATTGATACCTTTGGGCTTTTTGCCAAGTGCTACCAGTGCAAGGCCCCCACGCCGCCTCCGGTCGTGGCAGCACCGCCTCCTCACCCCTCGCCACCACTGA 1281 0.4965 MLPQKQAEEAIVTNFTETEHDGTGVGVIPREEDKDQDNSIFTLKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGMMGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFFGSWNDHLHGLVFSYSSACSRPGGKCDTLGSNQAMLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSASAVYWAFGDELLNHANAFSLLPKTAFRDAAVILMLIHQFVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKPSARQNAAEKPPVSCQAGRLCKLIPLGFLPSATSARPPRRLRSWQHRLLTPRHH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2292 426 Pfam Transmembrane amino acid transporter protein 49 328 IPR013057 -
Sto1g2292 426 PANTHER AUXIN INFLUX TRANSPORTER 328 385 - -
Sto1g2292 426 PANTHER AUXIN INFLUX TRANSPORTER 2 329 - -
Sto1g2292 426 PANTHER OS05G0424000 PROTEIN-RELATED 328 385 - -
Sto1g2292 426 PANTHER OS05G0424000 PROTEIN-RELATED 2 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2292 Sto-Chr1 30866619 30869517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2292 5 378 Organic Solute Cotransporters AT2G38120 70.560 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2292 K13946 - tcc:18597575 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0525 6 5704356 5709346 Sto1g2292 1 30866619 30869517 CCT
Sto1g2292 1 30866619 30869517 Sto1g2292 1 30866619 30869517 ECH