Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2289 ATGGTTGCTTCTAAGAAAATGTCCAAGAGCTTCTTTGATTGTCAATATGGCTTTATAAGCTGTACTGCCACATCCCTTGTCTTATATGCCATTTCATTTGTTGCTATATTTCTCATCATTGATTTACAAAATGTCTCCTCAATTCCTTCAAAGTTACATAACATTTATTTGACAACTCCAGAAACTGCAGGAGTACTAGTCTCACCTCATTCTGAGGAACTTTCTCATTCACCAATTGTTGATACTAGTGAACATTTTGAGCTTTCCCTGCAAGGAAATGGTGAAGAGAAAGGTTCTGAAGAAGATGATTATTCTCTTATTCCCCCAGAAAACATATCAACTCGAGAGAGAATTGCCTGGTTCAGAAGACAGCTTCCAGAGCTAAGGATATTCCAACCAACCACTTTATCACAGCAATTTCACAGCAGAGTCTTGAATTTCACTAACAAAGGCTGCTCAATTTTGTTTTACATGATATGGCTTTCACCATCACAATCCTTTGGGAAGAGAGAGTTTCTCACAATGGATACTTTGTTTAAGGCCCATCCTCAAGGATGCTTGCTGATCATATCAAAATCAATGGATTCCAAGCGCGGGAACCGAGTTCTGAAACCGCTGCTCGATCGAGGCTTCAAAGCCTTGGCAATCACACCAGATTTGCCTTTCTTGGTCAAGGACACCCCAGCTGAAGCATGGCTTGAAGAGATGAAAAGTGGAACCAGAGATCCAGGGAAAATTCCATTGTTCCAGAATCTATCCAATCTCTTGAGGCTAGCATTGTTGTACAAATATGGAGGTGTTTATGTAGACATAGATCTCATAATACTGAAGAATTTCTCAGGGTTGAGGAATGCAATTGGAGCACAGAGTGTGAATCCAGTGACTAAGAAATGGAACAGATTGAATGGTGCAGTTATGGTATTTGACAGGAAACATCCAATTCTGTTGGATTTCTTGCAGGAATTTGCTTCAACTTTTGATGGAAATAGATGGGGGCATAATGGGCCTTATTTGGTGTCAAGAGTTATAGATAGAGTGGGAAACACCCCAGGATACAACCTCACAATTTTGCCTCCACGAGCATTCTACCTTGTGGTTTGGAATAAAATTGAGAGGCTTTTCAAGAAGCCAGAAAATGAGATAGAAGCAAGATGGGTGGAGAGTGAGATAAAAGGTGTAAATAAAGGGGAGACCTATGCAGTTCATCTGTGGAACAAGATAAGCAGAGAATTTGACATTGAAGAGGGAAGTGTCATGGCAAGATTAATCTCAGAACATTGTATTGTTTGTGATAGCATAGCAAAAATTTTAGATGAGGAAGATTTCAAGTCTGATTCTTCAGGAACCTCAATTGGCTTGAGAAGTATTCAGAAATCTCTTGGAAAACAAGGAACTCATCCTAAAGCTGATGATAATGAActgattgaagaagaagaagaagatccttTGATCCCTCCAAAACATATGTCAAGGGATGAAAGAATAGATTGGTTCAGAAATCAACTTCCAAAGCTTAAGATATTCAAACCAGTGAATTCATCACAGCATTTCCACTACAGAGTCCTGAACTTCCTCAACCGAGGTTGCTCCACACTCTTCCACATCATATGGCTATCATCAGCAAAATCATTTGGGAAAAGAGAGTTCGTGACTTTGGATTCATTCTTCAAAGTCTACCCTCAACAGTGCTTGGTGATTCTATCAAGATCCATGGAGTCCAGACGTGGATACACAATCCTGAAGCCATTTCTTGATAGAGGGTTCAAAGTCATAGCCATCACTCCAGATTTGCCTTTCTTGTTCAAGGGCACTCCAGCAGAATCATGGCTTGAAGAGATGAAAAGTGGGGATAGAGACCCAGGATCTATCCCCTTGTTTCAGAATCTGTCAAATCTCTTGAGGCTAGCATTTCTGTACAAGTATGGAGGAGTGTACATGGATTCAGATATGATAATCATGAAGGATTTCACACAGTTCAAAAATGCAGTGGGAGCACAGAGTATAGACCCAGTGACAAGGAAATGGACAAGACTAAATGGTGCAGTTATGATATTTGACATTCACCATCCAATTCTTGTGGAATTTATGAGGGAATTTGCATTGAGTTTTGATGGGAATAAATGGGGTCATAATGGGCCTTACTTGGTTACAAGAGTGATAGAGAGAGTTGGAAACAGCCCAGGATACAACCTCACAATCTTGCCTCATAAAGCGTTTTTTCCTGTGGATTGGGTGAAAATTAGAAGGCTGTTCAAGAAGCCAGTGGATGAGTCAGATTCAAAATGGGTGGAGAATACGTTGATTTTTTCTGTATGA 2316 0.3968 MVASKKMSKSFFDCQYGFISCTATSLVLYAISFVAIFLIIDLQNVSSIPSKLHNIYLTTPETAGVLVSPHSEELSHSPIVDTSEHFELSLQGNGEEKGSEEDDYSLIPPENISTRERIAWFRRQLPELRIFQPTTLSQQFHSRVLNFTNKGCSILFYMIWLSPSQSFGKREFLTMDTLFKAHPQGCLLIISKSMDSKRGNRVLKPLLDRGFKALAITPDLPFLVKDTPAEAWLEEMKSGTRDPGKIPLFQNLSNLLRLALLYKYGGVYVDIDLIILKNFSGLRNAIGAQSVNPVTKKWNRLNGAVMVFDRKHPILLDFLQEFASTFDGNRWGHNGPYLVSRVIDRVGNTPGYNLTILPPRAFYLVVWNKIERLFKKPENEIEARWVESEIKGVNKGETYAVHLWNKISREFDIEEGSVMARLISEHCIVCDSIAKILDEEDFKSDSSGTSIGLRSIQKSLGKQGTHPKADDNELIEEEEEDPLIPPKHMSRDERIDWFRNQLPKLKIFKPVNSSQHFHYRVLNFLNRGCSTLFHIIWLSSAKSFGKREFVTLDSFFKVYPQQCLVILSRSMESRRGYTILKPFLDRGFKVIAITPDLPFLFKGTPAESWLEEMKSGDRDPGSIPLFQNLSNLLRLAFLYKYGGVYMDSDMIIMKDFTQFKNAVGAQSIDPVTRKWTRLNGAVMIFDIHHPILVEFMREFALSFDGNKWGHNGPYLVTRVIERVGNSPGYNLTILPHKAFFPVDWVKIRRLFKKPVDESDSKWVENTLIFSV 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2289 771 Gene3D - 527 740 - -
Sto1g2289 771 Gene3D - 176 384 - -
Sto1g2289 771 MobiDBLite consensus disorder prediction 459 488 - -
Sto1g2289 771 PANTHER 4-ALPHA-GALACTOSYLTRANSFERASE, PUTATIVE ISOFORM 1-RELATED 19 432 - -
Sto1g2289 771 PANTHER 4-ALPHA-GALACTOSYLTRANSFERASE, PUTATIVE ISOFORM 1-RELATED 460 768 - -
Sto1g2289 771 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 460 768 IPR044789 -
Sto1g2289 771 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 19 432 IPR044789 -
Sto1g2289 771 SUPERFAMILY Nucleotide-diphospho-sugar transferases 533 746 IPR029044 -
Sto1g2289 771 Pfam Alpha 1,4-glycosyltransferase conserved region 308 432 IPR007652 -
Sto1g2289 771 Pfam Alpha 1,4-glycosyltransferase conserved region 685 766 IPR007652 -
Sto1g2289 771 Pfam Glycosyltransferase sugar-binding region containing DXD motif 547 666 IPR007577 -
Sto1g2289 771 Pfam Glycosyltransferase sugar-binding region containing DXD motif 170 290 IPR007577 -
Sto1g2289 771 SUPERFAMILY Nucleotide-diphospho-sugar transferases 115 435 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2289 Sto-Chr1 30838243 30842713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2289 476 767 Glycosyltransferase AT2G38150 58.703 3.89e-129 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2289 K01988 - qsu:112031691 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2289 1 30838243 30842713 Sto1g2289 1 30838243 30842713 ECH