Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2267 ATGGTCCGAAGGCGGGATGCGACTTCGCGGGAAAAGTTTGCGAGTCTCGTGAACTCGGCCAAGTTGGCCATGGATATACCCTCCAAGCTCGGGTACTTGCGGCAGCTACAGCTAGAGTTGCCCCCGGAAGACCCCGTTTTGCTCACTGAGTTTCTCCCTTGCCTCTTAGAGTTTCAGTCCGACTCCTTCAGTCCAGTTCGCAAATTTGTGACCGAGATGGttggtgaaattggatccaAAAACACGGAGTTCTTGCCTGACATTATGCCTGTGCTCATTTCTGTTTTGGATGATGATACACCTGCTGTGGTTCGACAAGCTATATCATGTggaattaatttatttcattccaCTCTTGAGAAAATTGCTATACAGggtttatactCTAGTGATCTGGACAGTGCACTTGAATCTGCGTGGGCATGGATGGTAAAGTTCAAAGACAAAGTATTCTCATTAGCATTTCAACATGGGAGTGGTGGTACAAAGTTGCTGGCGCTGAAGTTTGTTGGATCAGTTATTAATCTATACACGCCTGATCCAAATGGTTCCTCAGAGCCCCCTCCTCATCAAGGAAGGCTTGTGGAGTTTAATATATCATGGATTAGGAGGGGTCATCCTGTACTCAATTTTAAAGATTTGTCAATTGAAGCTAGTCATAGTTTGGGTCTTTTGCTTGATCAACTCAGATTTCCAACAGTGAATTCTCTCAGTAACTCAGTAATCATCGTACTAATTAACAGCCTTTCAGCCATTGCGAAAGATAGGCCTACGTTCTATGGTCGCATCTTGCCAGTTTTGCTTGGTTTAGAACCATCAAGTTCTGTTATTAATGGGGTCTGTGTATCAGCTGCACATCATGCATTGAAGAAGGCCTTTGTTGCTTGCTTGAAATGTACTCATCCAAGTGCTGCTCCGtggaaAGAACGTTTGTCAAGTGCATTGGAGGAGATGCAGTCTGAAGGGATGGCAGACCAGATTTTCCACCAAGTTTCCAAGATTAATGGAAGTATAGGGAAAGAGAAGGATCATCATCTAGTTATTAAGGAAGAAAAACCTATGATAAGTTCATTTGATTCAGTACACAGTAATTTGGGAAAGAAGCGATCTGGATCACTGGATGGGAGTGATTTAGCTGAAGACGAAGATGTTCCTGAGAAGCGTATCAAAATAGAACCCAAGAAAGAGTTGGATGGAAGTGCCACAGTTTCTCTGGACAACAATCCTTCAACTGCACCAATCTCTTCAAAAGGAGATGTGGATAATGGGCCTGTTCAGCAACTTGTTGCAATGTTTGGTGCTTTGGTTGCTCAAGGCGAAAAAGCTGTTGCTTCTTTAGAAATTCTTATCTCAAGTATTTCCTCCGATTTGCTAGCTGAGGTGGTCATGGCTAATATGTGTAACCTACCTCCTAGTTATCTTAATGCTGAAGGAGATGATGAACCACTGCATGATATTAGTATAATTGGTTCTGATAACAAAGCTAAATATCCACCATCATTTGTAGCTGGGGTTATGTCACTTTCAAGTACTTTCCCACCAATAGCTTCGCTTCTTGATGCTAATCAATCAATGTCCAATGAGAAATCACAAGGGGAGGAAGAAAACTCTGCAACTGGGCTAGATGTGCATTCAGGCTTGAATCATTCATCTGAAAATGTAATGTTGCCTGCTGACTTTCCATCTTCTGATGCCAAAATACCTGGAATGGAGAATGTCAGTGCACGTGTGCCTTCTGACGTCCAGGATGTAGGAAATTTAGAGAGTGGAATCCCTGGCCTTGATTCTTTTGCTCGTAATGATGCCTTGTCAGAAACTGTGGCCGCTTCCTCAATGGCTTCCTCGGATATAGAAGAAGCCAGTCAAGAACAAGTTATGAGCTTGGTTCAAAGATCACCCATGAATATAGTTTCATCAATGTCAACAGATAGGTCTGAGGAGATAAGCCCAAAAGCAGCTGTTACAGATGTAAATAATGTGGTATCCTCAATTGCAACTTCAGACAGGTTGTCTTCCCGGTTGGTCCTGCCAAAGATGACTGCACCTGTTGTTGATCTTGCGGATGAACAGAAGGATAATTTGCAAAAATTGGCTTTTATTCGTGTTATTGATGCTTATAAGAAAATAGCAGTAGCTGGAGGATCAAAAATTCGATTTTCAATACTTGCATATCTAGGAGTTGAGCTTCCCTTGGACTTAGACCCATGGAAACTATTGCAGAAGCATATCTTGGTTGATTACACTAGTCATGAGGGGCATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGAtttcttttcatccacaacagcTGCTTCTGTATACGAGACATTCCTTCTAACAGTGGCAGAAGCACTAAGAGATTCTTTTCCACCTTCAGATAAATCCTTAAGTTTATTGCTTTGTGAAGCTCCTTATTTGCCAAAGTCAGTTTTAAATGTTTTAGAGAACATGTGTTCTCCTGGAAATTCTGAGAAAGTTGAAAAGGAGTCTCAGAGTGGGGATAGAGTTACTCAAGGTCTTATTGCTGTATGGAATCTGATTCTTCTGAGGCCTCCCATTCGAGATACCTGCTTGAAAATTGCTTTACagAGTGCAGTGCATCACTTGGAGGAAGTGCGTATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTATTCTTTAACATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAATGCTGTTCTCAGTTATGAGTGTTGATGCACCTGAGGCTACTGATGGTGAAGGATCTATTACTGAAACTCAAAAGgggCCTGATCATGAGAAGGCCTTGAATGAACCATCATCAATGAGTGGCAGCAGTAAGGATGATAATCACCAATCATGTACATCTGAAAGTGTCTCGTCAATTTCTGTCTCTGAGGCTCAGAGAAGCACATCAAAGGCAGTCAAGCAGGCAGTCCATCGTCATATCCCTATACTAGTCCGCACAATGGGCTCATCTTCAGATCTTCTTGAAATAATTTCAGATCCCCCAAATGGAAGCGAGAACCTCCTAATGCAGGTGTTGCACACACTTACGGATGGGAAAATTCCTTCTACGGATTTAATATTTACTGTCAAAAAATTACATGATTCAAAAGTTAAGGATGCGGAGGTTCTTTTACCTATATTGGCATATCTGCCAAAAGATGAGgtTTTGCCAATCTTTCCTCATATTGTGAACCTTCCTCTGGATAAGTTCCAAGCTGCACTTGCTCGCATTTTACAGAAATCATCACATTCTGGTCCCGTGCTTACACCGGCTGAAATATTAATTGCTATCCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAGAAGGCAGAAGCATGCAATGCTTGCTTTGAGCAGCGGCAGGTTTTCACTCAAGAAGTTGTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATCCCGCTTCCTTTATTGTTCATGCGGACAGTATTACAAGCTATTGGTACTTTTCCTACATTGGTGGACTTCATAATGGGGATTCTCTCTCGTCTTGTGGGGAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTCTTCTATTGACGAAACCTCAATCATTTGGTGTTTTGCTTCAGCTACCCCCAGCACAACTAGAAAATGCCTTAAATAGATATGCAGCTCTAAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATCCAATCTTCACTGCCCAGGTCCGTTTTGGTTGTTCTGGGAATTGCATCAGATCCTCAGATTCCAAGTCAAGCACAAACTAGTCAAGCACAAACAAGCCAAACACAAAATAGTCAAACACAGACTAGTGACACATGCAACTCTTACAAGGATACAGCAACAGAAAAATCTAAAGAATCATCTTCAGCTAGCTGA 3918 0.4135 MVRRRDATSREKFASLVNSAKLAMDIPSKLGYLRQLQLELPPEDPVLLTEFLPCLLEFQSDSFSPVRKFVTEMVGEIGSKNTEFLPDIMPVLISVLDDDTPAVVRQAISCGINLFHSTLEKIAIQGLYSSDLDSALESAWAWMVKFKDKVFSLAFQHGSGGTKLLALKFVGSVINLYTPDPNGSSEPPPHQGRLVEFNISWIRRGHPVLNFKDLSIEASHSLGLLLDQLRFPTVNSLSNSVIIVLINSLSAIAKDRPTFYGRILPVLLGLEPSSSVINGVCVSAAHHALKKAFVACLKCTHPSAAPWKERLSSALEEMQSEGMADQIFHQVSKINGSIGKEKDHHLVIKEEKPMISSFDSVHSNLGKKRSGSLDGSDLAEDEDVPEKRIKIEPKKELDGSATVSLDNNPSTAPISSKGDVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISSDLLAEVVMANMCNLPPSYLNAEGDDEPLHDISIIGSDNKAKYPPSFVAGVMSLSSTFPPIASLLDANQSMSNEKSQGEEENSATGLDVHSGLNHSSENVMLPADFPSSDAKIPGMENVSARVPSDVQDVGNLESGIPGLDSFARNDALSETVAASSMASSDIEEASQEQVMSLVQRSPMNIVSSMSTDRSEEISPKAAVTDVNNVVSSIATSDRLSSRLVLPKMTAPVVDLADEQKDNLQKLAFIRVIDAYKKIAVAGGSKIRFSILAYLGVELPLDLDPWKLLQKHILVDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSLLLCEAPYLPKSVLNVLENMCSPGNSEKVEKESQSGDRVTQGLIAVWNLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYSLTSISQQIEDFAKEMLFSVMSVDAPEATDGEGSITETQKGPDHEKALNEPSSMSGSSKDDNHQSCTSESVSSISVSEAQRSTSKAVKQAVHRHIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLHTLTDGKIPSTDLIFTVKKLHDSKVKDAEVLLPILAYLPKDEVLPIFPHIVNLPLDKFQAALARILQKSSHSGPVLTPAEILIAIHGIDPERDGIPLKKAEACNACFEQRQVFTQEVVAKVLNQLVEQIPLPLLFMRTVLQAIGTFPTLVDFIMGILSRLVGKQIWKYPKLWVGFLKCLLLTKPQSFGVLLQLPPAQLENALNRYAALKAPLIAHASQPDIQSSLPRSVLVVLGIASDPQIPSQAQTSQAQTSQTQNSQTQTSDTCNSYKDTATEKSKESSSAS 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2267 1305 MobiDBLite consensus disorder prediction 401 419 - -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 361 419 - -
Sto1g2267 1305 SUPERFAMILY ARM repeat 46 1000 IPR016024 -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 373 399 - -
Sto1g2267 1305 SUPERFAMILY ARM repeat 38 322 IPR016024 -
Sto1g2267 1305 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1198 - -
Sto1g2267 1305 Gene3D - 1 341 IPR011989 -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 1263 1305 - -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 921 973 - -
Sto1g2267 1305 PANTHER SYMPLEKIN/PTA1-RELATED 1 1198 - -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 944 973 - -
Sto1g2267 1305 Pfam Symplekin tight junction protein C terminal 1048 1225 IPR022075 -
Sto1g2267 1305 Pfam Symplekin/PTA1 N-terminal 101 319 IPR032460 -
Sto1g2267 1305 MobiDBLite consensus disorder prediction 1263 1291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2267 Sto-Chr1 30666636 30679066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2267 K06100 - gmx:100779360 1832.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2267 1 30666636 30679066 Sto1g2267 1 30666636 30679066 ECH