Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2263 ATGGTGATGGATTGCCAAACATGGCCTGAGCCAGTGATCCGAGTCCAAGCCTTAGCCGAGAGTGGCCTAACCACTATCCCAGAATGCTTCATCAAGCCTCTCTCCCAAAGGCCCACTTCTCTTAATAACAATAATACTTCTCCTAATTCCCCACAACAACATCAAAATAATGACCTCAATATCCCCACCATTGATCTCGGCCGCCTCTCGGGCTGTCCGGCCGACCGGGAGGACACGCTGCGGCGCATGGCGGAGGCGTGCCAGGAGTGGGGGTTCTTCCAAGTGGTGAACCATGGGGTGAGGCCTGAGCTAATGAGGAGTGCTAGGGCCGTCTGGCGCGAGTTCTTCCATCAGGCGCCGGAGGCCAAGGAGGCGTTCGCCAACTCCCCGGCCACGTACGAAGGCTACGGGAGCCGGTTGGGCGTCAAGAAGGGTGCCATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTGCTTCACTTAGGAAACAAGCCAAGTGGCCTAATGTTCCACAATCTTTAAGGGAAGTGATTGATGAATATGGTTCAGAAGTGGTGAAGCTGGGAGGGAGGTTGTTGAAGATAATGTCAACAAATTTGGGGCTAAAAGAGGATTATCTGATGAATGCATTTGGAGGAGAGGATGAGGTTGGAGGATGCTTAAGGGTGAATTTTTACCCAAAATGCCCTCAGCCTGACCTTACTTTGGGCATATCTCCTCACTCAGACCCTGGTGGTATGACCATTCTTCTGCCTGATGATCATGTTTCTGGCCTTCAAGTTCTCAAAGCAAATGAATGGGTCACTGTTAAACCTCTCCCAAATGCCTTCATCATCAACATCGGTGACCAAATTCAGATTATGAGCAATGAAATATACAAGAGTGTGGAGCACAAGGTGGTTGTGAACTCAAACAATGATAGAGTATCCTTGGCATTTTTCTACAATCCTAAGGGCAATTTAGTCATTGAGCCTGCTGAGGAGCTTGTGACAGAGGAAATGCCAGCTCTCTACCCTCCAATGACCTTTGATCAATACAGGCTCTTCATTAGGACTAAGGGTCTTTGTGGAAAAGCACAAGTTCAGTCTATGACTTCCCCTAAGAACTCTTATAATTAG 1125 0.4853 MVMDCQTWPEPVIRVQALAESGLTTIPECFIKPLSQRPTSLNNNNTSPNSPQQHQNNDLNIPTIDLGRLSGCPADREDTLRRMAEACQEWGFFQVVNHGVRPELMRSARAVWREFFHQAPEAKEAFANSPATYEGYGSRLGVKKGAILDWSDYFFLHYMPASLRKQAKWPNVPQSLREVIDEYGSEVVKLGGRLLKIMSTNLGLKEDYLMNAFGGEDEVGGCLRVNFYPKCPQPDLTLGISPHSDPGGMTILLPDDHVSGLQVLKANEWVTVKPLPNAFIINIGDQIQIMSNEIYKSVEHKVVVNSNNDRVSLAFFYNPKGNLVIEPAEELVTEEMPALYPPMTFDQYRLFIRTKGLCGKAQVQSMTSPKNSYN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2263 374 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 4 364 - -
Sto1g2263 374 SUPERFAMILY Clavaminate synthase-like 11 355 - -
Sto1g2263 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 170 IPR026992 -
Sto1g2263 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 218 319 IPR005123 -
Sto1g2263 374 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 4 364 - -
Sto1g2263 374 MobiDBLite consensus disorder prediction 37 58 - -
Sto1g2263 374 Pfam 2OG-Fe(II) oxygenase superfamily 222 319 IPR044861 -
Sto1g2263 374 Gene3D - 10 353 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2263 Sto-Chr1 30639728 30642538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2263 15 366 Glycosyltransferase AT5G59530 32.778 1.54e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2263 - - pvu:PHAVU_010G000300g 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2263 1 30639728 30642538 Sto1g2263 1 30639728 30642538 ECH