Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2181 ATGGATCAGGTTGTAAGCAAGGTTGGAACGTATTGGTTTAGCCAGAAGGCTTCCAAGGAACTCAATTCTGTTAGCACCGATATCAATTCACTAACAAACAGTATTGAAGGAGGAACCAAATGGTTGGTCAACAAAGTGaaagGAAAGATGCAGAAGGCACTACCAGAGTTTCTAAAGGAGTACGACCTACCAATAGGAATGTTCCCTCGTGACGCGACAAACTACGAGTTCAATGAGGAGACCAAGAAGCTGGTGGTTCATATTCCTGAGGTGTGCGAAGTTGGATACAAGGATTCTTCGGTGTTGCGTTTCGACACGGTGGTGAGTGGTGTGTTGGAGAACGGTAAATTGTCGGAGGTTGAAGGAATGAAGACGAAGGTCACTTTGATTTGGATAAAAGTCACCAATATTGTGACCGAAGGACCCTCCAAGCTTCATGTCACTGCTGGTTTGAGGAAAACCAGAAGTAGGGAAGCTTATGAGATTCCTAGAGATGGTGTCTTGGTAGACAAATTCTAA 519 0.4412 MDQVVSKVGTYWFSQKASKELNSVSTDINSLTNSIEGGTKWLVNKVKGKMQKALPEFLKEYDLPIGMFPRDATNYEFNEETKKLVVHIPEVCEVGYKDSSVLRFDTVVSGVLENGKLSEVEGMKTKVTLIWIKVTNIVTEGPSKLHVTAGLRKTRSREAYEIPRDGVLVDKF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2181 172 Pfam Protein of unknown function, DUF538 56 161 IPR007493 -
Sto1g2181 172 PANTHER T31J12.3 PROTEIN-RELATED 9 172 IPR007493 -
Sto1g2181 172 Gene3D - 32 172 IPR036758 -
Sto1g2181 172 PANTHER DUF538 FAMILY PROTEIN 9 172 - -
Sto1g2181 172 SUPERFAMILY At5g01610-like 3 171 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2181 Sto-Chr1 29978563 29979895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2181 - - gmx:100500143 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0464 6 5081708 5084713 Sto1g2181 1 29978563 29979895 CCT
Sto1g2181 1 29978563 29979895 Sto1g2181 1 29978563 29979895 ECH