Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2180 ATGCCTCCCAATCCTCCCAAATCCTCTCTCCTCCTTCACCGAATCAACCACGCCACCTCCACCGCCGCCGTCGCCCACCGCCACCACCTCGACGTCGCCGACGAAGACTCCCTAACCAATCTCGTCACGGCCTCATCCTCCTCCGCCTCCGTGCCCGACACCGTCGCTCGATACCACTCCCACGCCGTTTCCCCCAACCAGTGCTGCTCCGCCGTCACGCAGGAGATCGCCGCTCCCGTCTCCACCGTCTGGTCCGTCGTCCGCCGATTCGACAACCCCCAGGCCTACAAGCACTTCGTCAAGAGCTGCCACGTCCTCGTCGGCGACGGCGACGTCGGCACCCTCCGCGAGATCCACGTCATCTCCGGCCTCCCCGCCGTGAACAGCACGGAGCGCCTCGAGATCCTCGACGACGAGCGTCACGTCCTCAGCTTCAGCGTCGTCGGCGGCGAGCACAGGCTGTCCAATTACCGGTCCGTGACCACACTCCACCCCGCCGGTGCCGGAAAAGACGACGTGGACGGCGAGAGAACCGTGGTGGTGGAGTCGTACGTGGCGGATGTGCCGGCGGGGAACACGAGGGAGGACACTTGTGTGTTCTTGGATACGATCATCATATATACTGGGAACAGAACTTGA 639 0.6416 MPPNPPKSSLLLHRINHATSTAAVAHRHHLDVADEDSLTNLVTASSSSASVPDTVARYHSHAVSPNQCCSAVTQEIAAPVSTVWSVVRRFDNPQAYKHFVKSCHVLVGDGDVGTLREIHVISGLPAVNSTERLEILDDERHVLSFSVVGGEHRLSNYRSVTTLHPAGAGKDDVDGERTVVVESYVADVPAGNTREDTCVFLDTIIIYTGNRT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2180 212 CDD PYR_PYL_RCAR_like 68 205 - -
Sto1g2180 212 PANTHER - 38 205 - -
Sto1g2180 212 Gene3D - 20 208 IPR023393 -
Sto1g2180 212 SUPERFAMILY Bet v1-like 68 205 - -
Sto1g2180 212 Pfam Polyketide cyclase / dehydrase and lipid transport 68 195 IPR019587 -
Sto1g2180 212 PANTHER ABSCISIC ACID RECEPTOR PYL4-LIKE 38 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2180 Sto-Chr1 29972463 29973429 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2180 K14496 - vvi:100267073 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2180 1 29972463 29973429 Sto5g1476 5 10144589 10146497 ECH
Sto1g2180 1 29972463 29973429 Sto1g2180 1 29972463 29973429 ECH