Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2166 ATGGGGGCAGGGAGGAAAACACAAACATTTTATGCCAGTGGGAGTCAACCTATCCCTCCAAATGCAGTAGTCAGTTCATTATGTGGCAGGAATTTGGCGAAGCATCAACTTGGTGGTGTCATATTTGGTTGCAAGAATACCACAATAAAAGAATGTCTATCTAAACAACTCTTTGGTTTACCAGCTCAGCACTTCTCCTATGTGAAGAATATTGATCCTGGGCTGCCTCTCTTTCTGTTCAACTATAGTGACAGGAAGCTTCATGGAATCTTCGAGGCGGCTAGTAGTGGGCAAATGTTTATTGACCCTTATGGATGGACTGCTGATGGCTCAGAGAGAACACTATACCCTGCACAGGTGCAAATTCGTGTTCGGCTTCAGTGCCAGCCACTATCTGAAGATAAATTCAGACAAGTAATATTGGACAACTACTATTTCAATAATCACTTCTGGTTTGAGCTAGACCATGGACAGACTAGCAAGCTAATGTCTTTGCTAGCATCTTCTGCAATTGGTCCAGGCAATTATATACCACAGAAAACAATGCAGTGGAGAACTGTATCTCGATCTCTTCCATCACATGAAACTTCACTGGAAGGTGTAGCATTTGGAAATCAAAATTCAGAAATGGAGAATTCTACTCAGTTAAGCCAGAAATCTGATTCCTCTGGAATTGCTTCATCTTTCGATGCTAATGCAGACATCTGGCAATGGGATTCTCACAATGTTGTGAAGGACGCAGAACAGGATGAGAAATCCCTTATATTCATGAAACTAAAAGAATTGGCTCTTAATCGTGAAAGTCAAGACCCTTCTTTGTCAGGCATGTCAGAAGACACTCCTGACGTGAATGACATGAACTTTGCTGAGAAAGGTTATCTGGAGGCATCAACTGGTTtagagaagaaggaagagtgTCCCAGTCCTCCATTTGAGTATCAGTACATCATAACCCAGTTGATGCAAGAGGTCAAAGAACTGACAGCTTTCAAGGCAACACAGACTCAGAAGTATTGTTATCTAGAGCAGAAGCTGGTGGAGGCAGAATTGGAAATTCAACATCTAAAAGATCGCTGTACAACATTAGAATCTGCATATAATCTTTCTCTGGAACATGATGAAAAGACAGTTATCCAGTCTTCTAATGAGCTACATTTAGACCTTAAAGAGTCATTATTTTTAATAGGAGGCTATGATGGAGAATCATTTTTAGCAACTATGGATTTGTATTGTCCTTCCCTCAATGTGCTTAAATCTTTAAAGCCTATGAGCTCAGTTCGCTCATATGCTTCAGTTGTGCAGTCAAATGGTGAGCTTTATGTGTTTGGTGGTGGAGATGGTAGTGAATGTTGGTATGACACAGTTGAGTCATACAATCCAATTAGTGACAAGTGGACATTGTGGCCATCTTTGAATCAGAAGAAAGGCTCCTTGGCTGGAGCTGCTTTAAGCAACAAAATATTTGCCATTGGCGGAGGCAATGGAATTGATTGTTATTCAGATGTTGAGATGCTTGATTTAGACCTAGAACGATGGATCTGTGCACGTTCAATGCTAGACAAGaGGTTTGCTCTTGCTGCAGTGGAGTTCAATGGCGTGATTTATGCTACTGGTGGATTTGATGGGAATGACTATCTGCAGTCTGCTGAAAGATTTGACCCTAGGGAACATTCATGGACCAAAATAGCAAACATGAACACAAATCGGGGCTGCCATTCATTGGTTGTCCTAAACGAAAAGTTGTATGCTCTAGGTGGCTTTGATGGTGAAGCAATGGTTTCAAGTGTTGAAGTGTTCGATCCCCGTCTTGGGACATGGATGATGGGGGAACCCATGAATCATTCTAGGGGATATTCTGCTGCTGCTGTTGTCAAAGATTCGATTTATGTGATTGGGGGAGTTAAGGTTAACGAGAACATTTTAGATACAGTTGAGAATTATAAGGAAGGTCAGGGATGGCAAGAAACTTGCGCAACAAGGGTTGGCAAAAGGTGTTTCTTGTCAGCTATTTCCCTGTAG 2019 0.4126 MGAGRKTQTFYASGSQPIPPNAVVSSLCGRNLAKHQLGGVIFGCKNTTIKECLSKQLFGLPAQHFSYVKNIDPGLPLFLFNYSDRKLHGIFEAASSGQMFIDPYGWTADGSERTLYPAQVQIRVRLQCQPLSEDKFRQVILDNYYFNNHFWFELDHGQTSKLMSLLASSAIGPGNYIPQKTMQWRTVSRSLPSHETSLEGVAFGNQNSEMENSTQLSQKSDSSGIASSFDANADIWQWDSHNVVKDAEQDEKSLIFMKLKELALNRESQDPSLSGMSEDTPDVNDMNFAEKGYLEASTGLEKKEECPSPPFEYQYIITQLMQEVKELTAFKATQTQKYCYLEQKLVEAELEIQHLKDRCTTLESAYNLSLEHDEKTVIQSSNELHLDLKESLFLIGGYDGESFLATMDLYCPSLNVLKSLKPMSSVRSYASVVQSNGELYVFGGGDGSECWYDTVESYNPISDKWTLWPSLNQKKGSLAGAALSNKIFAIGGGNGIDCYSDVEMLDLDLERWICARSMLDKRFALAAVEFNGVIYATGGFDGNDYLQSAERFDPREHSWTKIANMNTNRGCHSLVVLNEKLYALGGFDGEAMVSSVEVFDPRLGTWMMGEPMNHSRGYSAAAVVKDSIYVIGGVKVNENILDTVENYKEGQGWQETCATRVGKRCFLSAISL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2166 672 Gene3D - 515 672 IPR015915 GO:0005515
Sto1g2166 672 SMART dcd 35 168 IPR013989 -
Sto1g2166 672 Coils Coil 345 365 - -
Sto1g2166 672 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 20 671 - -
Sto1g2166 672 Pfam Kelch motif 569 613 IPR006652 GO:0005515
Sto1g2166 672 Pfam Kelch motif 481 518 IPR006652 GO:0005515
Sto1g2166 672 Pfam Kelch motif 427 471 IPR006652 GO:0005515
Sto1g2166 672 Pfam Kelch motif 525 566 IPR006652 GO:0005515
Sto1g2166 672 SUPERFAMILY Kelch motif 390 669 IPR015915 GO:0005515
Sto1g2166 672 Gene3D - 385 514 IPR015915 GO:0005515
Sto1g2166 672 ProSiteProfiles DCD domain profile. 35 168 IPR013989 -
Sto1g2166 672 SMART kelc_smart 438 485 IPR006652 GO:0005515
Sto1g2166 672 SMART kelc_smart 391 437 IPR006652 GO:0005515
Sto1g2166 672 SMART kelc_smart 580 626 IPR006652 GO:0005515
Sto1g2166 672 SMART kelc_smart 533 579 IPR006652 GO:0005515
Sto1g2166 672 SMART kelc_smart 486 532 IPR006652 GO:0005515
Sto1g2166 672 PANTHER - 20 671 IPR044832 GO:0034976
Sto1g2166 672 Pfam Development and cell death domain 38 165 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2166 Sto-Chr1 29874794 29880649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2166 534 640 EF-hand Containing Proteins AT4G39560 30.769 7.76e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2166 - - pvu:PHAVU_008G092000g 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2166 1 29874794 29880649 Sto1g2166 1 29874794 29880649 ECH