Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2160 ATGAAGAAGCAGAAATCCCCTGAAACGAAGAACCCATTTGATCTTCTCTCGGAGGAGCTCGTCTTCTCCATCCTCGACCTCCTTGCTCCGAACCCACTTGACAAGAAGTCGTTTTCCTTAGTCTGCAAATCTTTCTACGCAATTGAAGCCAAGCATCGCCGAACCCTCACACCTCTTCGCTCCGAGCTCCTTCCTTCGATCTTGAAGAGATACCCATTTGTTACCCAACTCGATCTCTCTCTGTGCGCTCGAGTATCCGACAATTCCCTCAACTTCATAGCGAAATCTTACAGAGCCACGCTTCAGAGGATCGATCTCTCGCGGTCCAAGTTCTTCTCTGCTAATGGGTTGTGCAGCTTGGCTCTCAATTGCAAGAATCTTGTAGAGCTGGACTTGTCCAATGCGACGGAGCTGAAAGACGCGGCGGCGTCTGCGGTGGCTCAGGCGAAGAATTTGGAGAAGCTGTGGTTGGCGAGGTGCAAGCTAATCACGGACATGGGAGTTGGGTGTATAGCTGTTGGGTGTAGGAAGTTGAAATTGATTTGCTTGAAGTGGTGTTTGGGTGTGGGCGATTTAGGAGTGGATTTAATCGCTGTCAAGTGTAAGGAACTTCGAAGTTTGGATCTCTCTTATTTGCCTATCACAGAAAAATGTCTGCCTTCTATTGTTAAATTGCAATACCTTGAAGATTTGATTCTTGAAGGATGCTTTGGCATTGATGACGACAGCCTTGATGTCTTCAAACAAGGGTGCACGACATTAAAGAAACTCGATATCTCAGGTTGTCATAACATAAGTCATATAGGTCTGTCTGCCCTAACAAGCCATTCTGGATGCCTTGAACAACTTACTTTAGCAGATAGTTCTCCTGTAACACGTGCTCTTGCCGATGCTTTGAATAAACTTCCCATTCTGCAATCCATCAGATTAGATGGTTGCCAGGTTACTTCTGCTGGATTAAAGGCCATTGGAAGTTCATGCATGTCGTTAAAAGAGTTGAGTTTAAGCAAATGTTTGGGAGTGACAGATGAAGCTCTCTCATTTCTTCTGTCAAAACACAAGGATTTGAGGAAGCTTGACATCACATGCTGCCGCAGTATAACTCATCTTTCAATTGCCAGCATTGTAAATTCGTGCACTAATCTCATTTCCCTCAGGATGGAGTCCTGTACCTTAGTTCCAAGAGAAGCGTTTGTCTTGATTGGACAGCGATGTCATTCTCTTGAGGAGCTTGACCTAACAGATAACGAAATTGATGATGAAGGTCTTAAGACCATTTCTCGCTGCACCAGACTCTCCAATCTAAAACTAGGAATCTGCCTGAACATAACTGACAGGGGACTAGCCTATATTGGCATGTGCTGCCCAAAATTAAAGGAGTTAGATCTCTACAGGTCTACAGGAATAACTGATTTGGGCATTTCAGCAATTGCTTGTGGTTGCCCTAGTCTTGAGATGATTAGTATTGCATATTGTACTGACATCACCGATGGTTCCTTAATCTGCTTGTCAAAATGCTTGAAGTTGAAAACACTGGAACTTCGTGGATGTCTCCATGTCACATCTAATGGTCTAGCAACTATTGCAATGAGTTGTAAGCAACTATATCGTCTAGACGTAAAGAAGTGTTACAACATTGATGATAGTGGGATGATTTCACTTGCTCGATACTCCCAGAATCTAAGACAGATAAATCTGTCATACAGCTCAGTCACAGATGTGGGGTTACTGTCCCTTGCTAGCATCAGTTGCCTACACACCTTCACTGTCTTGCATTTGCAGGGTGTGACCGCAAGAGGACTTGCGGCAGCCTTGTTGGCATTTGGAGGGCTAAGAAAAGTGAAGCTCCACGTGTCCTTGAGATCCGCGTTACCGGAGCTTCTTATCAAACACATAGAAGCTCGAGGTTGTGTTTTTGAATGGAGAAACAAAGTGTTTCAGGCTGAGTTGGACCCCAAATGTTGGAAATTACAGTTGGAGGATCTGATGCAAGTTGTCTAA 2001 0.4448 MKKQKSPETKNPFDLLSEELVFSILDLLAPNPLDKKSFSLVCKSFYAIEAKHRRTLTPLRSELLPSILKRYPFVTQLDLSLCARVSDNSLNFIAKSYRATLQRIDLSRSKFFSANGLCSLALNCKNLVELDLSNATELKDAAASAVAQAKNLEKLWLARCKLITDMGVGCIAVGCRKLKLICLKWCLGVGDLGVDLIAVKCKELRSLDLSYLPITEKCLPSIVKLQYLEDLILEGCFGIDDDSLDVFKQGCTTLKKLDISGCHNISHIGLSALTSHSGCLEQLTLADSSPVTRALADALNKLPILQSIRLDGCQVTSAGLKAIGSSCMSLKELSLSKCLGVTDEALSFLLSKHKDLRKLDITCCRSITHLSIASIVNSCTNLISLRMESCTLVPREAFVLIGQRCHSLEELDLTDNEIDDEGLKTISRCTRLSNLKLGICLNITDRGLAYIGMCCPKLKELDLYRSTGITDLGISAIACGCPSLEMISIAYCTDITDGSLICLSKCLKLKTLELRGCLHVTSNGLATIAMSCKQLYRLDVKKCYNIDDSGMISLARYSQNLRQINLSYSSVTDVGLLSLASISCLHTFTVLHLQGVTARGLAAALLAFGGLRKVKLHVSLRSALPELLIKHIEARGCVFEWRNKVFQAELDPKCWKLQLEDLMQVV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2160 666 SMART LRR_CC_2 430 454 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 98 123 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 558 582 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 327 352 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 71 96 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 481 506 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 507 531 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 353 378 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 405 429 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 455 480 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 251 276 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 302 326 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 175 200 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 150 174 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 379 404 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 532 557 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 124 149 IPR006553 -
Sto1g2160 666 SMART LRR_CC_2 201 225 IPR006553 -
Sto1g2160 666 SUPERFAMILY RNI-like 60 285 - -
Sto1g2160 666 Pfam Leucine Rich repeat 405 427 IPR001611 GO:0005515
Sto1g2160 666 Pfam Leucine Rich repeat 455 478 IPR001611 GO:0005515
Sto1g2160 666 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Sto1g2160 666 Pfam Leucine Rich repeat 326 349 IPR001611 GO:0005515
Sto1g2160 666 Pfam Leucine Rich repeat 251 273 IPR001611 GO:0005515
Sto1g2160 666 Pfam Leucine Rich repeat 505 529 IPR001611 GO:0005515
Sto1g2160 666 Gene3D Ribonuclease Inhibitor 6 196 IPR032675 -
Sto1g2160 666 Gene3D Ribonuclease Inhibitor 197 294 IPR032675 -
Sto1g2160 666 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 1 600 - -
Sto1g2160 666 PANTHER UNCHARACTERIZED 1 600 - -
Sto1g2160 666 SUPERFAMILY RNI-like 221 584 - -
Sto1g2160 666 Gene3D Ribonuclease Inhibitor 398 649 IPR032675 -
Sto1g2160 666 Coils Coil 135 155 - -
Sto1g2160 666 Gene3D Ribonuclease Inhibitor 295 397 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2160 Sto-Chr1 29824590 29829144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2160 K10268 - gmx:100803617 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2160 1 29824590 29829144 Sto1g2160 1 29824590 29829144 ECH