Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2159 ATGGAAAACCAAAGGGGGAGAGAGAGCAGCGGCGGTATGCGGCTGTCGGAGGTGGTGGCGGAGTGTGTTAAGCGGTGGTTCAGGGACACACTGAAGGAGGCTAAAGCAGGGGATATCAACATGCAAGTGTTAGTCGCTCAGATGTATTACACTGGTTATGGAGTTCCTAGAGACGCCCAGATGGGAAGAATATGGCTTACCAGAGCATCAAGAAGTAGGTCTTCGGTTTGGAAAGTTTGTGATAAGCATCCAGGTTATAATGCAAGTGATTCTGACTCTGATGAATTGAAGGGTGAGAATTAA 303 0.4785 MENQRGRESSGGMRLSEVVAECVKRWFRDTLKEAKAGDINMQVLVAQMYYTGYGVPRDAQMGRIWLTRASRSRSSVWKVCDKHPGYNASDSDSDELKGEN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2159 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 2 99 - -
Sto1g2159 100 Gene3D Tetratricopeptide repeat domain 21 85 IPR011990 GO:0005515
Sto1g2159 100 SUPERFAMILY HCP-like 32 70 - -
Sto1g2159 100 PANTHER EXPRESSED PROTEIN 2 99 - -
Sto1g2159 100 SMART sel1 39 74 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2159 Sto-Chr1 29815362 29817085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2159 - - zju:107431268 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0439 6 4848312 4849703 Sto1g2159 1 29815362 29817085 CCT
Sto1g2159 1 29815362 29817085 Sto1g2159 1 29815362 29817085 ECH