Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2113 ATGGGGAACTGCATTGCTAAGTCTTCAACCAAGGACAGCGATTCTGATCATCTCGTGGAGTTTGCCGCCGGCAATGTGAAACTTATCACCACTAAAGAATCTTGGGACCAGAATTTGGAAGAAGCAAGGAGGGATGGAAAAATTGTGATCGCGAACTTCAGTGCGACATGGTGTGGTCCTTGTAAGATGATTGCGCCATTTTTTTGCGAGTTATCTGAGAAATACCCGTCTATAATGTTCTTAGTAATTGACGTCGACGAACTCACTGACTTTAGCACTTCATGGGATATCAAAGCTACTCCAACTTTCTTCTTTCTGAGAGATGGAAAACAGATTGACAAACTGGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAAATTATTGCCATTGTTGATTCAATGGCCCCATGTCAATAG 417 0.4317 MGNCIAKSSTKDSDSDHLVEFAAGNVKLITTKESWDQNLEEARRDGKIVIANFSATWCGPCKMIAPFFCELSEKYPSIMFLVIDVDELTDFSTSWDIKATPTFFFLRDGKQIDKLVGANKPELQKKIIAIVDSMAPCQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2113 138 Pfam Thioredoxin 29 127 IPR013766 -
Sto1g2113 138 PRINTS Thioredoxin family signature 49 57 - -
Sto1g2113 138 PRINTS Thioredoxin family signature 57 66 - -
Sto1g2113 138 PRINTS Thioredoxin family signature 96 107 - -
Sto1g2113 138 PANTHER THIOREDOXIN 1 137 - -
Sto1g2113 138 Gene3D Glutaredoxin 1 138 - -
Sto1g2113 138 CDD TRX_family 37 127 - -
Sto1g2113 138 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Sto1g2113 138 ProSiteProfiles Thioredoxin domain profile. 17 132 IPR013766 -
Sto1g2113 138 PANTHER THIOREDOXIN 1 137 - -
Sto1g2113 138 SUPERFAMILY Thioredoxin-like 22 130 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2113 Sto-Chr1 29360518 29363161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2113 K03671 - gmx:100813401 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0370 6 4168562 4170908 Sto1g2113 1 29360518 29363161 CCT
Sto1g2113 1 29360518 29363161 Sto1g2113 1 29360518 29363161 ECH