Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2097 aTGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCTAGAGCCGCTTCTCCTCAGGTTAGAAGCAACCCAGAAGCCGAAAGctttGCTTGCAGTCAGTACTTATCGGAGTTGCTAGCTGAGCATCAGAAGCTTGGACCCTTCATGCAAGTGCTTCCGATATGCAGTCGATTGTTAAATCAAGAAATATTAAGGGTTTCTGGAATGATGTCCAACCAAGGTTTTGGTGACATCGACAGACTGCGGCATAGAAGCCCTAGTCCTATGGCTTCTTCGAACCTCATGTCAAATGTTGCCGGGACAGGTTTGGGTGGCTGGAATAATCTTCCTCCAGAGAGACTATGTGGAGCACCTGGAATGACAATGGACTGGCAAGGCGCGCCTGCAAGTCCTAGTTCATACACTGTTAAGAGGATATTGCGCTTGGAAATTCCAGTAGATACATACCCCaatTTCAATTTTGTTGGAAGACTTTTGGGGCCTAGAGGCAATTCTCTGAAACGGGTAGAAGCTACTACAGGTTGCCGTGTGTATATTAGAGGAAAGGGATCAATAAAGGATCCAGATAAGGAAGAAAAATTACGAGGAAGACCGGGCTATGAGCATCTCAATGAACCACTGCACATTTTAATTGAGGCTGATTTACCTGCTAATGTTGTTGACTTAAGGCTCAGACAAGCACAGGAAATTATAGAAGAATTACTCAAGCCCGTGGACGAGTCGCAGGATTTTATCAAGAGGCAGCAGTTGCGGGAACTAGCGATGCTGAATTCAAATTTCAGAGAGGAGAGTCCAGGACCAAGTGGTGGCAGTGTATCTCCATTCAATTCAAGTGGAATGAAGAGAGCAAAAACTGGACGCTAA 861 0.4518 MSGLYNPNFSPARAASPQVRSNPEAESFACSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMMSNQGFGDIDRLRHRSPSPMASSNLMSNVAGTGLGGWNNLPPERLCGAPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDLRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2097 286 Pfam Homodimerisation region of STAR domain protein 31 76 IPR032377 -
Sto1g2097 286 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 2 286 - -
Sto1g2097 286 CDD SF1_like-KH 140 260 - -
Sto1g2097 286 ProSiteProfiles Type-1 KH domain profile. 152 209 - -
Sto1g2097 286 Gene3D K Homology domain, type 1 25 266 IPR036612 GO:0003723
Sto1g2097 286 PANTHER RNA-BINDING PROTEIN RELATED 2 286 IPR045071 -
Sto1g2097 286 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 142 260 IPR036612 GO:0003723
Sto1g2097 286 Pfam KH domain 152 188 IPR004088 GO:0003723
Sto1g2097 286 SMART kh_6 135 235 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2097 Sto-Chr1 29260987 29266488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2097 K14945 - gmx:100797384 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0362 6 4086375 4091175 Sto1g2097 1 29260987 29266488 CCT