Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2089 ATGAAGGAGGGGCAGAGGAGGAGCCCACGAATATCTGCAATGGAAGCGTGGCAGACCcgtgggtccgggtccgggtcaaAGAGATCGGGTGACCCGGCTGTACGGTCAGGGTCCAAAGGTACAAATGCAGGTGCTTGTATACACAAAACGAGGAATAGGAATCACTTGGATAATGGTCAGGGACCAGCATTTCAGACTAGGGGTAGGAAGAAGAGAAAACTGAGGCCAGTTGAAGAATTGACTGCTTCATCTTCAGTAATATCTAAACTCAAGCAGGGTCAGAAACAATCTGATGATGAAGATATTCAAAAGGAAAGTGATCAACCATCAAAGTTACCAGCAGCGACGGTTATGCCAGAAAAACGGATACTTGAACTTGTCCTTAACATTTTACAAAGGAGAGACACCTATGAAATATTTGCTGAACCAGTTGATCCAAAAGAGGTTGAGGATTATTATGAAATCATAGAAGAGCCTATGGATTTTGGCACCATGAGGGCTAAACTACATGAAGGGATGTACAAGAGTCTAGATCAATTTGAGCATGATGTTTTTCTAATATTCAACAATGCAATGCATTTTAATTCTTCTGGAACCATATATTTCAGGCAGGCCCGTACCATTAATGAGCTAGCTAAGAAGGttttcaatgttttaaaatcCGATCCTGAGAATTTTGAATCAGAATTCTCAGAAACAAGACAAAGAGTGAGTAGGAGAAACCAAGGAGATAATAAGGATTCAGCAAATGTGAAATTCAGTGAATCAACTATTGGTATGTCCTCAAAAAGCATGCCATGTTCCTCTCATGCTACACCAAACAGGAAAGCCTCCAGGTCAAATCAAGGGCGCGATAATTCTAAGCTTGTTGATGCTGGAGATCTTGAGGATCCAAAGGGTAAGAGggaatatgtgtatattttgTTGTCTCCTTTGGCATTGATACTAAAGGCTGCCTTTCCATTTGATCACTATGTGGTGGCCTACAAAATACTGCCTTTTGGTATCATTTTCGTGTATTCACGGAAGATAAGCAATCTTGCACTTAGTACCAGAAACAGTGGAAGAAAGAAGTATTTTGAAGGAGACAAGCGCAGTACTTATAGACCTTCAAATTCAATGTCCCTAGGAGAGGATGAGTCAATTTTCCCAACAGTTTATGGTAAATTGAAACTACTCAAGCATGTCAATCCCCCAGATCTCAGCTACAGAGAAAGCTTGATGTTGTTTGCTAAAGATTTAGGACAAGCAGCCCAAAATGTAGTGAGGAAGAAGCTATTTGGATGTGAAATTCATACAGCATCTTCTTCTACCCCATGGAGACCTATTACTACAAATCCAGATCCTTCCCTAACATCACAGAATCCCTTAAACCAGTTTCCAGGTCATCCTCCTAACGAGCTAAGATGGCCGAGAGACACAATTAATTTGAAGATTTCCGGTGTCAACGTCAATGATGACATTGATCGTGCTAAAGTGGAAGAAGGGACACTAGTCTCTGGCAGAGGAAATGCTCATAGTCCCATAAAAGGGAATATTCTTGCAAGTCAAAGGATCTCTATTGGGTATGATCAAGTGTACAAATCAAAGTCAAGTAAAGAAGAACAGCAGCCAGAATCATCAGCTATAGAGCATCCTCAAACAATGTCAAGATCAATGTTGGAAAACAAATGTGTAGTGTTTGGATCACAGACAACTAGAGATAGTAAAAGGGGTGACTCTGAAAATACAGCTTGTTCATATGAAGCTGGGAGGATGTTACAATTGGAGCAAACTGTGCCACTAACTTCCAGTTTCATTTTCAATCTGCCATATTTGAAGACAAGACTTGATCAGATAAACTCGTCGGAGCATTATAGGTTGTCACAGATAGATtcaggtggtggtggtggcagcgGCAGCAAGTGGCCGTGCACCGTTCAAGTGAGTAGTTATAAGGGAGGTTTGAGCTGCAACCATACAACTGATCTGAACTCTGCTAGTTACAACGGTCATAATCTGCAGCCACCATTATTGAATCATCAACGCACTGATTCATCTCCTTCGCTCTAA 2052 0.3957 MKEGQRRSPRISAMEAWQTRGSGSGSKRSGDPAVRSGSKGTNAGACIHKTRNRNHLDNGQGPAFQTRGRKKRKLRPVEELTASSSVISKLKQGQKQSDDEDIQKESDQPSKLPAATVMPEKRILELVLNILQRRDTYEIFAEPVDPKEVEDYYEIIEEPMDFGTMRAKLHEGMYKSLDQFEHDVFLIFNNAMHFNSSGTIYFRQARTINELAKKVFNVLKSDPENFESEFSETRQRVSRRNQGDNKDSANVKFSESTIGMSSKSMPCSSHATPNRKASRSNQGRDNSKLVDAGDLEDPKGKREYVYILLSPLALILKAAFPFDHYVVAYKILPFGIIFVYSRKISNLALSTRNSGRKKYFEGDKRSTYRPSNSMSLGEDESIFPTVYGKLKLLKHVNPPDLSYRESLMLFAKDLGQAAQNVVRKKLFGCEIHTASSSTPWRPITTNPDPSLTSQNPLNQFPGHPPNELRWPRDTINLKISGVNVNDDIDRAKVEEGTLVSGRGNAHSPIKGNILASQRISIGYDQVYKSKSSKEEQQPESSAIEHPQTMSRSMLENKCVVFGSQTTRDSKRGDSENTACSYEAGRMLQLEQTVPLTSSFIFNLPYLKTRLDQINSSEHYRLSQIDSGGGGGSGSKWPCTVQVSSYKGGLSCNHTTDLNSASYNGHNLQPPLLNHQRTDSSPSL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2089 683 MobiDBLite consensus disorder prediction 93 107 - -
Sto1g2089 683 MobiDBLite consensus disorder prediction 527 549 - -
Sto1g2089 683 MobiDBLite consensus disorder prediction 15 31 - -
Sto1g2089 683 PANTHER BROMODOMAIN CONTAINING PROTEIN 550 636 - -
Sto1g2089 683 PANTHER BROMODOMAIN CONTAINING PROTEIN 355 437 - -
Sto1g2089 683 PANTHER BROMODOMAIN CONTAINING PROTEIN 2 274 - -
Sto1g2089 683 MobiDBLite consensus disorder prediction 227 246 - -
Sto1g2089 683 MobiDBLite consensus disorder prediction 1 114 - -
Sto1g2089 683 Pfam Bromodomain 128 206 IPR001487 GO:0005515
Sto1g2089 683 Gene3D - 83 241 IPR036427 GO:0005515
Sto1g2089 683 SUPERFAMILY Bromodomain 109 225 IPR036427 GO:0005515
Sto1g2089 683 PANTHER BROMODOMAIN-CONTAINING PROTEIN 550 636 - -
Sto1g2089 683 PANTHER BROMODOMAIN-CONTAINING PROTEIN 2 274 - -
Sto1g2089 683 PANTHER BROMODOMAIN-CONTAINING PROTEIN 355 437 - -
Sto1g2089 683 PRINTS Bromodomain signature 135 148 IPR001487 GO:0005515
Sto1g2089 683 PRINTS Bromodomain signature 149 165 IPR001487 GO:0005515
Sto1g2089 683 PRINTS Bromodomain signature 165 183 IPR001487 GO:0005515
Sto1g2089 683 PRINTS Bromodomain signature 183 202 IPR001487 GO:0005515
Sto1g2089 683 MobiDBLite consensus disorder prediction 247 287 - -
Sto1g2089 683 CDD Bromodomain 120 216 - -
Sto1g2089 683 ProSiteProfiles Bromodomain profile. 132 202 IPR001487 GO:0005515
Sto1g2089 683 MobiDBLite consensus disorder prediction 662 683 - -
Sto1g2089 683 MobiDBLite consensus disorder prediction 227 294 - -
Sto1g2089 683 SMART bromo_6 113 221 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2089 Sto-Chr1 29205234 29209041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2089 K22184 - qsu:112028511 334.339