Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2012 ATGGTCACTCTGCGTCTCTCTCTTCAAGAGGAATCCAACCAgGTACTTTTTACAGGGAATTCTTATGTGAAAGAAGTGATATTGAACAGACCTATGAATCTAAATGTTCTTACTTATGAAATGGTGTCTTTGATTAATGGAGTTGTCATGGGAGCAGGCGCTGGAATATCAATCCATGGAAGCTTTAGAGTTGTCACAGAAAAAGCCGTATTCGCCATGCCTGAGGTAGCCATTGGACTTTTTCCAGATGTGGGCGCATCTTACTTCCTTTCAAGGCTCCCTGGCTACTTTGgggAATATTTAGGACTAACAGGAACTCGTTTGGATGGAGCGGAGATGGTTGTATGTGGCCTTGCTACACATTTCGTCCCTTCTATGAATTTAAATTCAATGGAAAATGCATTAAAAACTGTGACTTCATCAGACATATCAGCAATTGCTACACTGATAGATCAATTTACAGAAATTGCTCATCTCAAAGAACATAGTCCTTTAAGGAGGTTGGAGACAATAAACAAATGCTTCTCAAATGGAACCGTTGAGGAAATAATTCTATCATTGGAAAATGAAGCCAGGAATAATGCTACAGAAAAATGGATTACAAATGCATTGAGTTCTATGCGTTCAGCATCTCCTACAAGTCTTAAACTTTGTCTAAGATTGATTAGAGAAGGTCGTGTTCAGAACATTAAACAATGCCTTAATCGCGAATACAATATTGCCGGCCACTCAATAAGACGCACCGTAAACAGTGACTTTTATgagTGGGAGCCTTCAATGGTAGAGCAGGTTAGCCAAGAAATGATAGATCAATGTTTTAGTGATGTGGATGATGACAATTGGCAAAGCTTGGTACTTCCTTCTAGATCCAACCTAAGAATTAGCAAATTGTAG 894 0.387 MVTLRLSLQEESNQVLFTGNSYVKEVILNRPMNLNVLTYEMVSLINGVVMGAGAGISIHGSFRVVTEKAVFAMPEVAIGLFPDVGASYFLSRLPGYFGEYLGLTGTRLDGAEMVVCGLATHFVPSMNLNSMENALKTVTSSDISAIATLIDQFTEIAHLKEHSPLRRLETINKCFSNGTVEEIILSLENEARNNATEKWITNALSSMRSASPTSLKLCLRLIREGRVQNIKQCLNREYNIAGHSIRRTVNSDFYEWEPSMVEQVSQEMIDQCFSDVDDDNWQSLVLPSRSNLRISKL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2012 297 Gene3D - 41 286 - -
Sto1g2012 297 CDD crotonase-like 27 125 - -
Sto1g2012 297 Pfam Enoyl-CoA hydratase/isomerase 41 269 IPR045004 -
Sto1g2012 297 SUPERFAMILY ClpP/crotonase 40 246 IPR029045 -
Sto1g2012 297 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 41 289 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2012 Sto-Chr1 28516020 28526142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2012 19 292 Miscellaneous Gene Families AT5G65940 48.264 1.09e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2012 K05605 - gmx:100811222 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2012 1 28516020 28526142 Sto1g2012 1 28516020 28526142 ECH