Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1947 ATGGATGAACCGCCGACGCAGCAGATGGAAGCCGCGCGTTCTTCAGAATTAGTATCACCGCCATCGCCCGAATCCGCCGACAATGGTCTCGATCGGAACGATTCGGCGAATTCCTCGCCGAATATTCGTAAGGATGCTGAAATTGAGTCTCCGGACGTGTTGAAGAGCGAAGAGTACCGTCAATTGTTTCGACTTCCTACGGAAGAAGTCCTCATTGAAGATTTTAACTGCGCCCTTCAGGAAAATATACTAATTCagGGTCATATGTAcctgtttattaattttatttgtttctacTCCAACATATTTGGGTTTGAGACAAAGAGAATAATTCCATTCCATGAAGTCACCAGTGTCCGGAAGGCAAAGACAGCAGGACTCTTTCCTAATGCCATTGAAATTTTTGTTGGAAGCAGGAAGTACTTTTTTGCATCCTTTCTGTCCCGTGATGAAGCTTTCAATATCATTAATGATGGGTGGGCGCAGCTAGGCAATGGTTCCAGAACTATCACTGAGCAGCAGATTATGGATGAAGTAGCATATAGGTTGATATTGGGGAGGAAGTCATGGGTATTGGGTATTTCTGATATATTTCTCGTAACCTTTACCCTCATCTTTATATCAGTTTTGACTTTTAAGGAGTCAGTATCTGAGTCCAGCAGTGCTGAgaatggaattatagctattGAAAAAGTGAACAGTTCTGGTATACTAGACAATGAATCGCTTGCTACCAATCTGAGCAAAGAGAATTCTTGCAAAGATATTGTATCAATGACACCTCCAGAGCAGCAATCCAGAGTAAATCAAGGTGACGAATCTGTATCTAATACTGCTGATTCAAGAATGACCTGGAATTGGAAGGAAGAGGATATTAATGCTCCGAAAGTACCAGAAGATTTTACAAATGTTGCAGAAGCAAAATTTCTGATACAGGTAGAGGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTTAGTTTTCTTGAGTCTTTCCATAAAAGATGTGGAGATAAAGACTTAAAGTGTACTTCATGGAATCCTCGAGAAGATTTTGGGTATGCTCGTGAAAAGTCATTTCAGCATCCAATAAAACTTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGGTTCAGACATTACGGATATACAAGAACAGTCATTTGGTTTTAGAGACATCGCAAGAAGTCAGCGACGTACCTTATGCAGATTATTTCCGCGTTGAGGGACGGTGGGATGTACAGAGAGACATCATTGAATCAAAAGAATGTTGCATTTTACGAGTTTACGTGAATGTGgcattttctaagaaaactATTTGGAAAGGAAAAATAGTACAGTCAACAATTGAAGAATGCCGAGAAGCTTATGCAACATATATAAGCATGGTACACGAgttgttgaagaagaagaaccttGAAAAACAAGAAGAAAGTGGTCCTACTATTACTACTAGTGTGACTCAAACTGGTGAAGTAAATTTACATAGCGAACAAAAAACTGAAGAATCTTCAGAAACTTCAGAGGAGCCAAGTAACCCTGTAAGGGAAGAGACTATATCTGACATTGTCAATCCCAACCACAATGCTGGCAACAGGTTGCAAGGAAATTTGATTGACTCAACATCTATTTCCTATATGTTAAGGGAAATTATGACGAAATTCCGGTCTTCTATAAAAAATCAGAGCCATCTTGCACTGTTCCTAGTTATCATTTTTGCAGTCATTTTTTTCATGCAGCAGTTTAGCATACTTGTACTGTTGTCTAGATCCCAACACATCCATGTGAGCCCTCCAGCAGATTTTTATAATAGGATAGAGAATGGAGTTACGAGAAGCCCCTCAGACATAGCTTGGTTGGAGAAAAGGATTCACTACCTCAAAGATGAGATGTACATGGTAGAGACTAGGCTTGAGAGGATGAGGTATGAACATGCCCTATTGAAAAAGCAACTGAAAGATCTTGAGTCACAACCTAGATGGAAAGATAGATACCCACCAAACTATGAATGA 2013 0.386 MDEPPTQQMEAARSSELVSPPSPESADNGLDRNDSANSSPNIRKDAEIESPDVLKSEEYRQLFRLPTEEVLIEDFNCALQENILIQGHMYLFINFICFYSNIFGFETKRIIPFHEVTSVRKAKTAGLFPNAIEIFVGSRKYFFASFLSRDEAFNIINDGWAQLGNGSRTITEQQIMDEVAYRLILGRKSWVLGISDIFLVTFTLIFISVLTFKESVSESSSAENGIIAIEKVNSSGILDNESLATNLSKENSCKDIVSMTPPEQQSRVNQGDESVSNTADSRMTWNWKEEDINAPKVPEDFTNVAEAKFLIQVEDFFRYFFSDDAVSFLESFHKRCGDKDLKCTSWNPREDFGYAREKSFQHPIKLYLGAKFGGCHEVQTLRIYKNSHLVLETSQEVSDVPYADYFRVEGRWDVQRDIIESKECCILRVYVNVAFSKKTIWKGKIVQSTIEECREAYATYISMVHELLKKKNLEKQEESGPTITTSVTQTGEVNLHSEQKTEESSETSEEPSNPVREETISDIVNPNHNAGNRLQGNLIDSTSISYMLREIMTKFRSSIKNQSHLALFLVIIFAVIFFMQQFSILVLLSRSQHIHVSPPADFYNRIENGVTRSPSDIAWLEKRIHYLKDEMYMVETRLERMRYEHALLKKQLKDLESQPRWKDRYPPNYE 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1947 670 Pfam VAD1 Analog of StAR-related lipid transfer domain 304 452 IPR031968 -
Sto1g1947 670 Pfam GRAM domain 59 162 IPR004182 -
Sto1g1947 670 MobiDBLite consensus disorder prediction 1 47 - -
Sto1g1947 670 SMART gram2001c 57 123 IPR004182 -
Sto1g1947 670 ProSiteProfiles VASt domain profile. 300 472 IPR031968 -
Sto1g1947 670 MobiDBLite consensus disorder prediction 496 516 - -
Sto1g1947 670 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 15 174 - -
Sto1g1947 670 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 215 656 - -
Sto1g1947 670 Gene3D - 55 162 IPR011993 -
Sto1g1947 670 Coils Coil 638 658 - -
Sto1g1947 670 MobiDBLite consensus disorder prediction 478 495 - -
Sto1g1947 670 MobiDBLite consensus disorder prediction 474 516 - -
Sto1g1947 670 CDD PH-GRAM_GRAMDC 68 160 - -
Sto1g1947 670 MobiDBLite consensus disorder prediction 260 279 - -
Sto1g1947 670 MobiDBLite consensus disorder prediction 1 44 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1947 - - gmx:100805910 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1947 1 27829620 27841453 Sto1g1947 1 27829620 27841453 ECH