Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1946 ATGGAGTACCAAGGTTCCACCAACTGGGAAGGTTTACTAGACCCCTTGGACCACAACCTCCGCGCCGAGATTCTCCGATACGGCCGCTTCGTCGAAGCCGCCTACGCCACGTCGTGTCGCTTCCCCGAGAACACGCCCTTCCGCGGCAGCGGCTATAGAGTGACCAAGCGCCTACGCGCCACCTCAGGGATCAAACTGCCGAAATCATCTTGGTTCGAAACGACGCCGTCCAGTAGCAGCTACATTGGCTACGTGGCCGTGTGCGACGACGAGGAGGAGATTAAACGACTCGGCCGTCGAGACGTCGTTGTCGCTTACAGAGGAACGACAACGTGCTTGGAGTGGCTCGAGAACTTCCGCACCAATCTCACCCGCGTGAATAATAGTAGTAGTGGCGGCGCTATGGTGCAACGCGGGTTCCTGAGTCTGTACACGTCGTCCACGTCATCGAGCCTTCAACGAATGGTGCGTGAGGAGATTGGTCGGATCGTTCGGGCCCACGGTGGTGGGGACGAGCCTATCAGCGTGACCGTCACCGGTCACAGCCTCGGGGCGGCGCTGGCGATTCTCACGGCGCACGACGTGAAGGCGGCGACGGGGATTCCGACGGTGACGGCGATCACGTTCGGCGGGCCGCGCGTGGGGAACGCGCGGTTCAGGGAGATGGTGGAGAGGGGAGGGACGAAGGTTCTGCGCGTGGTGAACACGGAGGATGTGGTCACGAAAGTGCCGGGGTTTGTGGGGATTGGTGGTGAGGGTGACGTGGCGAGAGGCGGGGGTGCCCACGTGGCGAGGTGGTTGGGGGAGTGGGGCCGCTACGCGGAGGTGGGGAAGGAGCTGCGTTTGTGTAGTAGGGATTCTCCGTACCTGAGTGGGATGAATGTGGCCACGTGTCACGATCTGAAGACGTATCTACACTTGGTGGATGGCTTTGTTAGCTCCACGTGTCCCTTTAGGGCCACCGCAAAGAGGTTGAGAGATCTTGATCAGAGGAAAAAATTAGGAACGAAGAAGACGGCTCAAAGCTGCGCCAAACTCAAGAAAATCGCCATTGATGGGTTGAAGAAGAATGAAGGCAATACTTGGACTCTGAATAACTCATATCAACCAAGTATATGCCTCGTGACATCGTATCTTACGGGAAGCAATTTCCTCTCATGGAGCCTTGCAGTAAAGAAAGCTATTGAAGCTAAGGGCAAGATAAGCTTCATTGACAGGTCAATAAAATCGCTCATACTGCTGAAAATGAGTTCAAGAAGTGGAAACCAATTGATTCCATGGTGA 1284 0.5631 MEYQGSTNWEGLLDPLDHNLRAEILRYGRFVEAAYATSCRFPENTPFRGSGYRVTKRLRATSGIKLPKSSWFETTPSSSSYIGYVAVCDDEEEIKRLGRRDVVVAYRGTTTCLEWLENFRTNLTRVNNSSSGGAMVQRGFLSLYTSSTSSSLQRMVREEIGRIVRAHGGGDEPISVTVTGHSLGAALAILTAHDVKAATGIPTVTAITFGGPRVGNARFREMVERGGTKVLRVVNTEDVVTKVPGFVGIGGEGDVARGGGAHVARWLGEWGRYAEVGKELRLCSRDSPYLSGMNVATCHDLKTYLHLVDGFVSSTCPFRATAKRLRDLDQRKKLGTKKTAQSCAKLKKIAIDGLKKNEGNTWTLNNSYQPSICLVTSYLTGSNFLSWSLAVKKAIEAKGKISFIDRSIKSLILLKMSSRSGNQLIPW 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1946 427 Gene3D alpha/beta hydrolase 1 371 IPR029058 -
Sto1g1946 427 SUPERFAMILY alpha/beta-Hydrolases 52 247 IPR029058 -
Sto1g1946 427 Pfam Lipase (class 3) 103 246 IPR002921 GO:0006629
Sto1g1946 427 CDD Lipase_3 20 309 - -
Sto1g1946 427 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 331 - -
Sto1g1946 427 Pfam gag-polypeptide of LTR copia-type 367 408 IPR029472 -
Sto1g1946 427 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1946 Sto-Chr1 27796592 27801799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1946 1 325 Acyl Lipid Metabolism Gene Families AT2G44810 57.778 5.82e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1946 K16818 - gmx:100801635 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1946 1 27796592 27801799 Sto1g1946 1 27796592 27801799 ECH